Table 5.

Phylogenetic signal, saturation of substitution process, p-distances, and effective codon usage in neuropterid PCGs

pcg/PROTEIN	%FRQ	m-slope	avg-pd	avg-ENC
pooled-(α+β) (full)	100	0.466	0.247 ± 0.034	34.758 ± 2.640
POOLED-(α+β) (FULL)	100	0.684	0.262 ± 0.062	n.a.c.
pooled-α (alpha)	100	0.458	0.248 ± 0.030	33.783 ± 2.111
POOLED-α (ALPHA)	98.6	0.676	0.238 ± 0.055	n.a.c.
pooled-β (beta)	92.86	0.442	0.246 ± 0.040	31.898 ± 1.603
POOLED-β (BETA)	94.3	0.625	0.297 ± 0.073	n.a.c.
nad2	61.43	0.392	0.346 ± 0.037	34.321 ± 3.279
NADH2	77.1	0.436	0.430 ± 0.067	n.a.c.
cox1	94.28	0.384	0.189 ± 0.023	33.991 ± 1.584
COI	91.4	0.908	0.105 ± 0.035	n.a.c.
cox2	75.71	0.491	0.209 ± 0.036	34.840 ± 4.054
COII	88.6	0.867	0.174 ± 0.076	n.a.c.
atp6	88.57	0.482	0.244 ± 0.034	34.105 ±2.770
ATP6	94.3	0.591	0.215 ± 0.061	n.a.c.
cox3	98.86	0.390	0.220 ± 0.032	33.890 ± 2.895
COIII	97.1	0.845	0.191 ± 0.059	n.a.c.
nad3	62.86	0.394	0.280 ± 0.032	30.720 ± 4.398
NADH3	70	0.751	0.313 ± 0.068	n.a.c.
nad5	84.28	0.377	0.249 ± 0.042	33.086 ± 2.306
NADH5	89.9	0.639	0.300 ± 0.078	n.a.c.
nad4	80.00	0.436	0.254 ± 0.044	31.771 ± 2.270
NADH4	88.6	0.608	0.315 ± 0.075	n.a.c.
nad4L	68.57	0.551	0.262 ± 0.044	31.150 ± 4.875
NADH4L	71.4	0.571	0.336 ± 0.067	n.a.c.
nad6	65.71	0.171	0.349 ± 0.045	32.722 ± 3.411
NADH6	82.8	0.360	0.468 ± 0.090	n.a.c.
cob	95.71	0.498	0.214 ± 0.030	32.932 ± 2.162
CYTB	88.6	0.639	0.182 ± 0.059	n.a.c.
nad1	81.43	0.516	0.217 ± 0.038	31.225 ± 2.100
NADH1	82.9	0.673	0.246 ± 0.072	n.a.c.

Pcg-PROTEIN, protein coding gene/relative protein; %FRQ, percent of fully resolved quartets obtained in a maximum likelihood mapping analysis [70]; m-slope, slope of the regression line passing through the origin in a scatter plot analysis of p-distances vs. GTR+I+G - mtREV24/JTT + G + G distances distances; avg-pd, average p-distance; avg-ENC, average-ENC (effective number of codon usage); n.a., not applicable calculation.