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. Author manuscript; available in PMC: 2012 May 13.
Published in final edited form as: Circ Res. 2011 May 13;108(10):1252–1269. doi: 10.1161/CIRCRESAHA.110.236067

TABLE 1.

Potential Explanations for the modest capture of Heritability by GWAS

  • A large number of common variants with low magnitude of effect – polygenic inheritance

  • Rare variants with large effects – single gene or oligogenic inheritance

  • Structural variants – rare variants with high mutation rates

  • Interactions between alleles at homologous loci (dominance) and between alleles at non-homologous loci (epistasis)

  • Parent of origin effects

  • Epigenetics effects

  • Underestimation of the effect of shared environment among relatives leading to inflated estimate of heritability.