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. Author manuscript; available in PMC: 2012 Jul 1.
Published in final edited form as: Pharmacogenet Genomics. 2011 Jul;21(7):388–396. doi: 10.1097/FPC.0b013e32834632e4

Table 4.

Association between the combined genotypes of MDM4 polymorphisms and SCCHN risk stratified by tumor sites

Genotypes Oropharynx Oral cavity Larynx and Hypopharynx


Control (n = 1,079) Case (n = 546) P OR (95% CI)a Case (n = 315) P OR (95% CI)a Case (n = 214) P OR (95% CI) a
rs11801299
GG 665 305 0.110c 1.00 191 0.600c 1.00 138 0.690c 1.00
AG 376 165 0.80 (0.63–1.01) 116 1.07 (0.81–1.42) 70 0.87 (0.61–1.24)
AA 38 26 1.24 (0.73–2.11) 8 0.65 (0.29–1.49) 6 0.54 (0.20–1.43)
AG+AA 414 191 0.182d 0.84 (0.67–1.05) 124 0.749d 1.03 (0.79–1.36) 76 0.432d 0.83 (0.59–1.18)
P for trende 0.342 0.876 0.199
rs1380576
CC 518 250 0.677c 1.00 141 0.586c 1.00 96 0.539c 1.00
CG 455 238 1.08 (0.87–1.35) 140 1.20 (0.90–1.59) 99 1.35 (0.95–1.92)
GG 106 58 1.15 (0.80–1.65) 34 1.29 (0.82–2.04) 19 1.11 (0.61–2.02)
CG+GG 561 296 0.397d 1.09 (0.89–1.35) 174 0.310d 1.21 (0.93–1.59) 118 0.400d 1.31 (0.93–1.83)
P for trende 0.373 0.154 0.260
rs10900598
GG 296 166 0.279c 1.00 87 0.230c 1.00 54 0.789c 1.00
GT 552 257 0.86 (0.67–1.10) 174 1.02 (0.75–1.40) 114 1.09 (0.73–1.62)
TT 231 123 0.97 (0.72–1.31) 54 0.76 (0.51–1.13) 46 1.02 (0.62–1.65)
GT+TT 783 380 0.210d 0.89 (0.71–1.12) 228 0.948d 0.94 (0.70–1.27) 160 0.508d 1.07 (0.73–1.56)
P for trende 0.738 0.218 0.909
No. of combined
risk genotypesf
0 228 93 0.050g 1.00 71 0.592g 1.00 42 0.621g
1–3 851 453 1.32 (1.00–1.73) 244 0.98 (0.71–1.35) 172 1.23 (0.81–1.87)
a

Adjusted for age, sex, smoking status, and alcohol use in a logistic regression model.

c

Two-side Chi-square test for the distribution of three genotypes.

d

Two-side Chi-square test for the distribution of combined genotypes under a dominant model.

e

Adjusted by age, sex, smoking status, and alcohol use.

f

This represents the number of risk genotypes rs11801299GG, rs1380576CG+GG, and rs10900598GG.

g

Two-side Chi-square test for the distribution of combined genotypes.