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. 2010 Feb;14(1):9–59. doi: 10.1089/omi.2009.0100

Table 3.

All Bacterial Taxa Detected by 16S rRNA Phylochip in Airway Samples of COPD Patients Being Treated for Severe Exacerbations

Phylum Class Order Family S-Fa Taxon IDb Representative speciesc
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 508 uranium mining waste pile clone JG37-AG-81 sp.
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 541 uranium mill tailings soil sample clone GuBH2-AG-47 sp.
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 209 uranium mining waste pile clone JG37-AG-29 sp.
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6425 Great Artesian Basin clone B27
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6335 forested wetland clone FW45
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_6 6345 soil sample uranium mining waste pile near town Johanngeorgenstadt clone JG36-TzT-77 bacterium
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6350 soil isolate Ellin337
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6356 forested wetland clone FW47
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_6 6359 PCE-contaminated site clone CLi114
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_6 6362 grassland soil clone DA052
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6366 PCB-polluted soil clone WD228
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6368 soil clone UA2
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6378 Acidobacterium capsulatum
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6410  
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6412 acid mine drainage clone TRB82
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_16 6414 PCE-contaminated site clone CLs73
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6421 PCB-polluted soil clone WD217
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_6 6423 coal effluent wetland clone FW92
Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae sf_14 6424 sphagnum peat bog clone K-5b10
Acidobacteria Unclassified Unclassified Unclassified sf_1 572 forested wetland clone FW144
Acidobacteria Acidobacteria-4 Ellin6075/11-25 Unclassified sf_1 435 anaerobic VC-degrading enrichment clone VC47 bacterium
Acidobacteria Acidobacteria-5 Unclassified Unclassified sf_1 523 soil metagenomic library clone 17F9
Acidobacteria Acidobacteria-4 Ellin6075/11-25 Unclassified sf_1 790 soil clone 11-25
Acidobacteria Acidobacteria-4 Ellin6075/11-25 Unclassified sf_1 87 activated sludge clone 2951
Acidobacteria Acidobacteria-6 Unclassified Unclassified sf_1 350 Mammoth cave clone CCM15a
Acidobacteria Acidobacteria-6 Unclassified Unclassified sf_1 897 Mammoth cave clone CCM8b
Acidobacteria Acidobacteria-6 Unclassified Unclassified sf_1 1049 soil clone C112
Acidobacteria Solibacteres Unclassified Unclassified sf_1 6426 Great Artesian Basin clone B11
Acidobacteria Acidobacteria-4 Unclassified Unclassified sf_1 6363 soil clone 32-11
Acidobacteria Unclassified Unclassified Unclassified sf_1 4222 forested wetland clone FW105
Actinobacteria Actinobacteria Acidimicrobiales Acidimicrobiaceae sf_1 1090  
Actinobacteria Actinobacteria Acidimicrobiales Acidimicrobiaceae sf_1 1749 forest soil clone DUNssu275 (-3A) (OTU#188)
Actinobacteria Actinobacteria Acidimicrobiales Acidimicrobiaceae sf_1 1856 forested wetland clone RCP2-105
Actinobacteria Actinobacteria Acidimicrobiales Acidimicrobiaceae sf_1 1360 forested wetland clone RCP2-103
Actinobacteria Actinobacteria Actinomycetales Acidothermaceae sf_1 1399 uranium mill tailings clone Gitt-KF-183
Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae sf_1 1684 Varibaculum cambriense str. CCUG 44998
Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae sf_1 1227 Actinomyces naeslundii
Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae sf_1 1672 Actinomyces odontolyticus str. CCUG 28084
Actinobacteria Actinobacteria Actinomycetales Actinosynnemataceae sf_1 1463 Saccharothrix texasensis str. NRRL B-16107T
Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae sf_1 1351 Bifidobacterium psychraerophilum str. T16
Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae sf_1 1967 Bifidobacterium pseudocatenulatum str. JCM1200
Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae sf_1 2040 Bifidobacterium adolescentis str. E-981074T
Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae sf_1 1109 Bifidobacterium thermacidophilum porcinum subsp. suis str. P3-14 subsp.
Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae sf_1 1987 human subgingival plaque clone CX010
Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae sf_1 1444 Bifidobacteriaceae genomosp. C1
Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae sf_1 1835 Bifidobacterium breve str. KB 92
Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae sf_1 1875  
Actinobacteria Actinobacteria Actinomycetales Cellulomonadaceae sf_1 1586 Cellulomonas gelida str. DSM 20111T
Actinobacteria Actinobacteria Actinomycetales Cellulomonadaceae sf_1 1748 Beutenbergia cavernosa str. DSM 12333
Actinobacteria Actinobacteria Coriobacteriales Coriobacteriaceae sf_1 1258 ground water deep-well injection disposal site radioactive wastes Tomsk-7 clone S15A-MN25
Actinobacteria Actinobacteria Coriobacteriales Coriobacteriaceae sf_1 1800 ground water deep-well injection disposal site radioactive wastes Tomsk-7 clone S15A-MN100
Actinobacteria Actinobacteria Coriobacteriales Coriobacteriaceae sf_1 1958 Atopobium vaginae VA14183_00
Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae sf_1 1517 Corynebacterium xerosis str. DSM 20743
Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae sf_1 1492 Corynebacterium tuscaniae str. ISS-5309
Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae sf_1 1820 Corynebacterium jeikeium str. ATCC 43734
Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae sf_1 1089 Corynebacterium mucifaciens National Microbiology Laboratory Special identifier 01-0118
Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae sf_1 1374  
Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae sf_1 1428 Corynebacterium simulans National Microbiology Laboratory Special identifier 00-0186
Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae sf_1 1493 Corynebacterium tuberculostearicum str. CIP102346
Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae sf_1 1803 Corynebacterium spheniscorum str. CCUG 45512
Actinobacteria Actinobacteria Actinomycetales Dermabacteraceae sf_1 2053 Brachybacterium nesterenkovii str. DSM 9573
Actinobacteria Actinobacteria Actinomycetales Kineosporiaceae sf_1 1598 lichen-dominated Antarctic cryptoendolithic community clone FBP402
Actinobacteria Actinobacteria Actinomycetales Kineosporiaceae sf_1 1961 Kineococcus aurantiacus str. IFO 15268
Actinobacteria Actinobacteria Actinomycetales Microbacteriaceae sf_1 1667 Microbacterium lacticum
Actinobacteria Actinobacteria Actinomycetales Microbacteriaceae sf_1 1197 Arctic sea ice ARK10173
Actinobacteria Actinobacteria Actinomycetales Microbacteriaceae sf_1 1437 freshwater clone SV1-16
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1266 Arthrobacter psychrolactophilus
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1557 Arthrobacter oxydans str. DSM 20119
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1593 Arthrobacter globiformis
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1610 Arthrobacter sp str. AC-51
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1966 TCE-contaminated site clone ccspost2208
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1324 glacial ice isolate str. CanDirty1
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1494 Arthrobacter agilis str. DSM 20550
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1573 Arthrobacter nicotianae str. SB42
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1889 Citricoccus sp. str. 2216.25.22
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 2019 Micrococcus luteus str. HN2-11
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1724 Rothia mucilaginosa str. DSM
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 2020 Rothia dentocariosa str. ChDC B200
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 2063 Rothia dentocariosa str. ATCC 17931
Actinobacteria Actinobacteria Actinomycetales Micrococcaceae sf_1 1213 Kocuria roseus
Actinobacteria Actinobacteria Actinomycetales Micromonosporaceae sf_1 1876 Couchioplanes subsp. caeruleus str. IFO13939
Actinobacteria Actinobacteria Actinomycetales Mycobacteriaceae sf_1 1175 Mycobacterium cf. xenopi 'Hymi_Wue Tb_939/99' str. Hymi_Wue Tb_939/99
Actinobacteria Actinobacteria Actinomycetales Mycobacteriaceae sf_1 1262 Mycobacterium holsaticum str. 1406
Actinobacteria Actinobacteria Actinomycetales Mycobacteriaceae sf_1 1308 Mycobacterium pyrenivorans str. DSM 44605
Actinobacteria Actinobacteria Actinomycetales Mycobacteriaceae sf_1 1365 Mycobacterium chelonae str. CIP 104535T
Actinobacteria Actinobacteria Actinomycetales Mycobacteriaceae sf_1 1650 Mycobacterium tuberculosis str. NCTC 7416 H37Rv
Actinobacteria Actinobacteria Actinomycetales Mycobacteriaceae sf_1 1726 Mycobacterium terrae str. ATCC 15755
Actinobacteria Actinobacteria Actinomycetales Nocardiaceae sf_1 1834 Nocardia transvalensis str. DSM 43405
Actinobacteria Actinobacteria Actinomycetales Nocardiopsaceae sf_1 1385 Streptomonospora salina str. YIM90002
Actinobacteria Actinobacteria Actinomycetales Promicromonosporaceae sf_1 1671 Cellulosimicrobium cellulans str. NCIMB 11025
Actinobacteria Actinobacteria Actinomycetales Promicromonosporaceae sf_1 1711 Promicromonospora sukumoe str. DSM 44121
Actinobacteria Actinobacteria Actinomycetales Pseudonocardiaceae sf_1 1863  
Actinobacteria Actinobacteria Actinomycetales Pseudonocardiaceae sf_1 1343 Saccharomonospora azurea str. M.Goodfel K161 = NA128 (type st
Actinobacteria Actinobacteria Rubrobacterales Rubrobacteraceae sf_1 1551 soil isolate Ellin301
Actinobacteria Actinobacteria Rubrobacterales Rubrobacteraceae sf_1 1739  
Actinobacteria Actinobacteria Rubrobacterales Rubrobacteraceae sf_1 1843 uranium mining waste pile soil sample clone JG30-KF-A23
Actinobacteria Actinobacteria Actinomycetales Sporichthyaceae sf_1 1695 lichen-dominated Antarctic cryptoendolithic community clone FBP417
Actinobacteria Actinobacteria Actinomycetales Streptosporangiaceae sf_1 1190 Nonomuraea polychroma str. IFO 14345
Actinobacteria Actinobacteria Actinomycetales Thermomonosporaceae sf_1 1741 Actinomadura pelletieri str. IMSNU 22169T
Actinobacteria Actinobacteria Actinomycetales Thermomonosporaceae sf_1 1546 Actinomadura fulvescens str. DSM 43923T
Actinobacteria Actinobacteria Unclassified Unclassified sf_2 1233  
Actinobacteria Actinobacteria Unclassified Unclassified sf_1 1898 termite gut homogenate clone Rs-J10 bacterium
Actinobacteria Actinobacteria Unclassified Unclassified sf_1 1367  
Actinobacteria Actinobacteria Unclassified Unclassified sf_1 1370 forested wetland clone RCP1-37
Actinobacteria Actinobacteria Acidimicrobiales Unclassified sf_1 1666  
Actinobacteria Actinobacteria Actinomycetales Unclassified sf_4 1337 Sturt arid-zone soil clone #0425-2M17
Actinobacteria Actinobacteria Actinomycetales Unclassified sf_3 1486 deep marine sediment clone MB-A2-108
Actinobacteria Actinobacteria Unclassified Unclassified sf_1 1676  
Actinobacteria Actinobacteria Acidimicrobiales Unclassified sf_1 1217 DCP-dechlorinating consortium clone SHA-34
Actinobacteria BD2-10 group Unclassified Unclassified sf_2 1652 marine sediment clone Bol7
Actinobacteria Actinobacteria Actinomycetales Unclassified sf_3 2045 hypersaline lake clone ML602J-44
Actinobacteria Actinobacteria Actinomycetales Unclassified sf_3 1130 Georgenia muralis str. 1A-C
Actinobacteria Actinobacteria Actinomycetales Unclassified sf_3 1687 Jonesia quinghaiensis str. DSM 15701
Actinobacteria Actinobacteria Actinomycetales Unclassified sf_3 1243 termite gut homogenate clone Rs-M95 bacterium
Actinobacteria Actinobacteria Actinomycetales Unclassified sf_3 1577 termite gut homogenate clone Rs-N91 bacterium
Actinobacteria Actinobacteria Actinomycetales Unclassified sf_3 1405 Arthrobacter ureafaciens str. DSM 20126
AD3 Unclassified Unclassified Unclassified sf_1 2338 uranium mining waste pile soil clone JG30-KF-C12
Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae sf_12 5256 termite gut homogenate clone Rs-D38 bacterium
Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae sf_12 5320 Bacteroides distasonis
Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae sf_12 5474 Bacteroides acidofaciens str.A24
Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae sf_12 5551 Bacteroides uniformis
Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae sf_12 5979 Bacteroides fragilis str. YCH46
Bacteroidetes Flavobacteria Flavobacteriales Blattabacteriaceae sf_1 5828 Blattabacterium species
Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae sf_11 5334 autotrophic nitrifying biofilm clone NB-11
Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae sf_11 5619 anaerobic VC-degrading enrichment clone VC10 bacterium
Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae sf_11 5888 penguin droppings sediments clone KD9-169
Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae sf_11 6123 Flexibacter japonensis str. IFO 16041
Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae sf_11 6267 Cilia-respiratory isolate str. 243-54
Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae sf_11 6249 Haliscomenobacter hydrossis
Bacteroidetes Sphingobacteria Sphingobacteriales Flammeovirgaceae sf_5 6084 Microscilla arenaria str. IFO 15982
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 6079 synonym: CFB group clone APe4_42
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5367 patient's bronchoalveolar lavage isolate str. MDA2507 sp.
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5915 groundwater deep-well injection disposal site radioactive wastes Tomsk-7 clone S15A-MN27 bacterium
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5997 Flavobacterium aquatile
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 6274  
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5317 Tenacibaculum maritimum str. IFO 15946
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5991 Tenacibaculum ovolyticum str. IAM14318
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 6252 Riftia pachyptila's tube clone R103-B20
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5263 subgingival plaque clone DZ074
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5401 Capnocytophaga gingivalis str. ChDC OS45
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5836 Capnocytophaga granulosa str. LMG 12119; FDC SD4
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5423 Aequorivita antarctica str. QSSC9-14
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5942  
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5955 Flavobacterium sp. str. V4.MS.29 = MM_2747
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5971 Cytophaga uliginosa
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5436 Arctic sea ice ARK10004
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5473  
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5267 bacterioplankton clone AEGEAN_179
Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae sf_1 5914 Psychroserpens burtonensis str. S2-64
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 5563 Cytophaga sp. I-545
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 5542 Cytophaga sp. I-1787
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 5307 Microscilla sericea str. IFO 16561
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 5357 Flexibacter ruber str. IFO 16677
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 5372  
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 5566 Hongiella mannitolivorans str. IMSNU 14012 JC2050
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 5667 penguin droppings sediments clone KD6-118
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 5994 Hymenobacter sp. str. NS/50
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 6124 Flexibacter flexilis subsp. pelliculosus str. IFO 16028 subsp.
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_19 6297 EBPR sludge lab scale clone HP1A92
Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae sf_20 10311 Cytophaga sp. str. BHI60-57B
Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae sf_1 5295 swine intestine clone p-987-s962-5
Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae sf_1 5680 termite gut clone Rs-106
Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae sf_1 5800 Porphyromonas endodontalis str. ATCC 35406
Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae sf_1 5817 termite gut homogenate clone Rs-N56 bacterium
Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae sf_1 5961 chlorobenzene-degrading consortium clone IA-16
Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae sf_1 5454 Dysgonomonas wimpennyi str. ANFA2
Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae sf_1 5510 sphagnum peat bog clone 26-4b2
Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae sf_1 6012 mouse feces clone L11-6
Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae sf_1 5460 mouse feces clone F8
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5718 Prevotella tannerae str. 29-1
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5437 cow rumen clone BE1
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5916 cow rumen clone BE14
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 6011 rumen clone F24-B03
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 6152 rumen clone RF37
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 6259  
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5249 Prevotella denticola str. ATCC 35308
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5484 oral periodontitis clone FX046
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5706 oral cavity clone 3.3
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5769 Bacteroidaceae str. A42
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5905 swine intestine clone p-2443-18B5
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5940 Prevotella sp. str. E7_34
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 5946 tongue dorsa clone DO027
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 6047 deep marine sediment clone MB-A2-107
Bacteroidetes Bacteroidetes Bacteroidales Prevotellaceae sf_1 6239 tongue dorsa clone DO033
Bacteroidetes Bacteroidetes Bacteroidales Rikenellaceae sf_5 5892 anoxic bulk soil flooded rice microcosm clone BSV73
Bacteroidetes Sphingobacteria Sphingobacteriales Sphingobacteriaceae sf_1 5513 crevicular epithelial cells clone AZ123
Bacteroidetes Sphingobacteria Sphingobacteriales Sphingobacteriaceae sf_1 5913 Sphingobacteriaceae str. Ellin160
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5573 termite gut homogenate clone Rs-D44 bacterium
Bacteroidetes Sphingobacteria Sphingobacteriales Unclassified sf_6 5439 Mono Lake at depth 35 m station 6 July 2000 clone ML635J-40 bacterium
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5475 SHA-25 clone
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5544 marine? clone KD3-17
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5783 Mono Lake at depth 35 m station 6 July 2000 clone ML635J-15 bacterium
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5874 Paralvinella palmiformis mucus secretions clone P. palm 53 bacterium
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5890 penguin droppings sediments clone KD1-125
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 6046 chlorobenzene-degrading consortium clone IIIB-1
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5820 cow rumen clone BF24
Bacteroidetes Unclassified Unclassified Unclassified sf_1 5745  
Bacteroidetes Flavobacteria Flavobacteriales Unclassified sf_3 5248 Delaware River estuary clone 1G12
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5355 DCP-dechlorinating consortium clone SHA-5
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5481 marine sediment above hydrate ridge clone Hyd89-72 bacterium
Bacteroidetes Unclassified Unclassified Unclassified sf_4 5703  
Bacteroidetes Unclassified Unclassified Unclassified sf_4 5785 Mono Lake at depth 35 m station 6 July 2000 clone ML635J-56
Bacteroidetes Unclassified Unclassified Unclassified sf_4 5787 Mono Lake at depth 35 m station 6 July 2000 clone ML635J-1 bacterium
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 5957 Paralvinella palmiformis mucus secretions clone P. palm C/20 bacterium
Bacteroidetes Bacteroidetes Bacteroidales Unclassified sf_15 6324 temperate estuarine mud clone KM02
Bacteroidetes Sphingobacteria Sphingobacteriales Unclassified sf_3 6168 Toolik Lake main station at 3 m depth clone TLM11/TLMdgge04
Bacteroidetes KSA1 Unclassified Unclassified sf_1 5951 CFB group clone ML615J-4
Bacteroidetes Sphingobacteria Sphingobacteriales Unclassified sf_3 6298 travertine hot spring clone SM1C04
BRC1 Unclassified Unclassified Unclassified sf_2 118 penguin droppings sediments clone KD1-1
BRC1 Unclassified Unclassified Unclassified sf_1 5051 soil clone PBS-III-24
BRC1 Unclassified Unclassified Unclassified sf_1 5143 soil clone PBS-II-1
Caldithrix Unclassified Caldithrales Caldithraceae sf_2 91 benzoate-degrading consortium clone BA059
Caldithrix Unclassified Caldithrales Caldithraceae sf_1 2384 saltmarsh clone LCP-89
Chlamydiae Chlamydiae Chlamydiales Chlamydiaceae sf_1 4820 Chlamydophila pneumoniae str. AR39
Chlamydiae Chlamydiae Chlamydiales Parachlamydiaceae sf_1 4964 neutral pH mine biofilm clone 44a-B1-34
Chlorobi Chlorobia Chlorobiales Chlorobiaceae sf_1 262 Chlorobium ferrooxidans DSM 13031 str. KofoX
Chlorobi Chlorobia Chlorobiales Chlorobiaceae sf_1 859 Chlorobium phaeovibrioides str. 2631
Chlorobi Chlorobia Chlorobiales Chlorobiaceae sf_1 995 Chlorobium limicola str. M1
Chlorobi Unclassified Unclassified Unclassified sf_8 5822 Saltmarsh mud clone K-790
Chlorobi Unclassified Unclassified Unclassified sf_6 5294 Mammoth cave clone CCM9b
Chlorobi Unclassified Unclassified Unclassified sf_9 6146 sludge clone A12b
Chlorobi Unclassified Unclassified Unclassified sf_8 549 benzene-degrading nitrate-reducing consortium clone Cart-N2 bacterium
Chlorobi Unclassified Unclassified Unclassified sf_8 636 benzene-degrading nitrate-reducing consortium clone Cart-N3 bacterium
Chloroflexi Thermomicrobia Unclassified Unclassified sf_1 1041 Antarctic cryptoendolith clone FBP471
Chloroflexi Unclassified Unclassified Unclassified sf_2 818  
Chloroflexi Unclassified Unclassified Unclassified sf_5 1051 forest soil clone DUNssu055 (-2B) (OTU#087)
Chloroflexi Anaerolineae Chloroflexi-1a Unclassified sf_1 927 Paralvinella palmiformis mucus secretions clone P. palm C 37 bacterium
Chloroflexi Thermomicrobia Unclassified Unclassified sf_2 652 uranium mining waste pile soil sample clone JG30-KF-CM45
Chloroflexi Anaerolineae Chloroflexi-1a Unclassified sf_1 106 DCP-dechlorinating consortium clone SHD-231
Chloroflexi Anaerolineae Unclassified Unclassified sf_9 375 forest soil clone C043
Chloroflexi Anaerolineae Chloroflexi-1a Unclassified sf_1 487 thermophilic UASB granular sludge isolate str. IMO-1 bacterium
Chloroflexi Anaerolineae Unclassified Unclassified sf_9 576 DCP-dechlorinating consortium clone SHA-36
Chloroflexi Anaerolineae Chloroflexi-1a Unclassified sf_1 583 anaerobic bioreactor clone SHD-238
Chloroflexi Anaerolineae Unclassified Unclassified sf_9 72 sediments collected at Charon's Cascade near Echo River October 2000 clone CCD21
Chloroflexi Anaerolineae Unclassified Unclassified sf_9 727 forest soil clone S0208
Chloroflexi Unclassified Unclassified Unclassified sf_7 757 DCP-dechlorinating consortium clone SHA-8
Chloroflexi Anaerolineae Chloroflexi-1a Unclassified sf_1 76 DCP-dechlorinating consortium clone SHA-147
Chloroflexi Anaerolineae Chloroflexi-1b Unclassified sf_2 789 travertine hot spring clone SM1D10
Chloroflexi Anaerolineae Unclassified Unclassified sf_9 946 temperate estuarine mud clone KM87
Chloroflexi Dehalococcoidetes Unclassified Unclassified sf_1 2339 uranium mill tailings soil sample clone Sh765B-TzT-20 bacterium
Chloroflexi Dehalococcoidetes Unclassified Unclassified sf_1 2367 deep marine sediment clone MB-B2-113
Chloroflexi Dehalococcoidetes Unclassified Unclassified sf_1 2438 deep marine sediment clone MB-A2-110
Chloroflexi Dehalococcoidetes Unclassified Unclassified sf_1 2445 deep marine sediment clone MB-A2-103
Chloroflexi Dehalococcoidetes Unclassified Unclassified sf_1 2485  
Chloroflexi Dehalococcoidetes Unclassified Unclassified sf_1 2497 forested wetland clone FW60
Chloroflexi Unclassified Unclassified Unclassified sf_12 2523 sponge clone TK10
Chloroflexi Chloroflexi-4 Unclassified Unclassified sf_2 2344 forest soil clone C083
Chloroflexi Unclassified Unclassified Unclassified sf_1 2534 forest soil clone S085
Coprothermobacteria Unclassified Unclassified Unclassified sf_1 751 Coprothermobacter sp. str. Dex80-3
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 4967 Toolik Lake main station at 3 m depth clone TLM14
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 5147 Emiliania huxleyi str. Plymouth Marine Laborator PML 92
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 5112 Cyanidium caldarium str. 14-1-1
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 5006  
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_11 5098 Euglena tripteris str. UW OB
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_11 5123 Lepocinclis fusiformis str. ACOI 1025
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 4966 Adiantum pedatum
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 4976 Calypogeia muelleriana
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_13 5000 Mitrastema yamamotoi
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 5040 Solanum nigrum
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 5182 Epifagus virginiana—chloroplast
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 5183 Pisum sativum—chloroplast
Cyanobacteria Cyanobacteria Chloroplasts Chloroplasts sf_5 5192 Cycas revoluta
Cyanobacteria Unclassified Unclassified Unclassified sf_5 4998  
Cyanobacteria Cyanobacteria Thermosynechococcus Unclassified sf_1 5012 Synechococcus sp. str. PCC 6312
Cyanobacteria Unclassified Unclassified Unclassified sf_9 5038 Rumen isolate str. YS2
Cyanobacteria Unclassified Unclassified Unclassified sf_9 5164 termite gut homogenate clone Rs-H34
Cyanobacteria Cyanobacteria Oscillatoriales Unclassified sf_1 5189 Oscillatoria sancta str. PCC 7515
Cyanobacteria Unclassified Unclassified Unclassified sf_5 5015 Chlorogloeopsis fritschii str. PCC 6912
Cyanobacteria Unclassified Unclassified Unclassified sf_5 5030 Hapalosiphon welwitschii
Cyanobacteria Cyanobacteria Nostocales Unclassified sf_1 5057 Nodularia sphaerocarpa str. UTEX B 2093
Cyanobacteria Cyanobacteria Oscillatoriales Unclassified sf_1 5049 Oscillatoria spongeliae str. 520 bg
Cyanobacteria Cyanobacteria Plectonema Unclassified sf_1 5190 Plectonema sp. str. F3
Cyanobacteria Unclassified Unclassified Unclassified sf_8 5206  
Deinococcus-Thermus Unclassified Unclassified Unclassified sf_1 178 Thermus sp. str. C4
Deinococcus-Thermus Unclassified Unclassified Unclassified sf_1 563 Vulcanithermus mediatlanticus str. TR
Deinococcus-Thermus Unclassified Unclassified Unclassified sf_2 637 hypersaline pond clone LA7-B27N
Deinococcus-Thermus Unclassified Unclassified Unclassified sf_3 920  
DSS1 Unclassified Unclassified Unclassified sf_2 38 DCP-dechlorinating consortium clone SHA-109
DSS1 Unclassified Unclassified Unclassified sf_1 4405 benzoate-degrading consortium clone BA143
Firmicutes Mollicutes Acholeplasmatales Acholeplasmataceae sf_1 3955 Weeping tea tree witches' broom phytoplasma tree
Firmicutes Mollicutes Acholeplasmatales Acholeplasmataceae sf_1 3961 Clover yellow edge mycoplasma-like organism
Firmicutes Mollicutes Acholeplasmatales Acholeplasmataceae sf_1 3975 Black raspberry witches' broom phytoplasma str. BRWB witches' broom room
Firmicutes Mollicutes Acholeplasmatales Acholeplasmataceae sf_1 3976  
Firmicutes Mollicutes Acholeplasmatales Acholeplasmataceae sf_1 4044  
Firmicutes Mollicutes Acholeplasmatales Acholeplasmataceae sf_1 4045 Chinaberry yellows phytoplasma
Firmicutes Mollicutes Acholeplasmatales Acholeplasmataceae sf_1 4046 Pigeon pea witches' broom mycoplasma-like organism
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3386 feedlot manure clone B87
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3522 Aerococcus viridans
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3631 Abiotrophia defectiva str. GIFU12707 (ATCC49176)
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3870 Abiotrophia para-adiacens str. TKT1
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3323 Trichococcus flocculiformis str. DSM 2094
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3326 Nostocoida limicola I str. Ben206
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3504 Marinilactibacillus psychrotolerans str. O21
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3553 Desemzia incerta str. DSM 20581
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3833 Carnobacterium alterfunditum
Firmicutes Bacilli Lactobacillales Aerococcaceae sf_1 3840 Trichococcus pasteurii str. KoTa2
Firmicutes Bacilli Bacillales Alicyclobacillaceae sf_1 3368 geothermal site isolate str. G1
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3612 Bacillus schlegelii str. ATCC 43741T
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3419 Bacillus algicola str. KMM 3737
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3424 uranium mill tailings clone Gitt-KF-76
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3661 Bacillus sp. str. 2216.25.2
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3688 Bacillus sp. str. SAFN-006
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3926 Lake Bogoria isolate 64B4
Firmicutes Bacilli Bacillales Bacillaceae sf_1 234 Bacillus vulcani str. 3S-1
Firmicutes Bacilli Bacillales Bacillaceae sf_1 283 Geobacillus thermocatenulatus str. DSM 730
Firmicutes Bacilli Bacillales Bacillaceae sf_1 305 Bacillus thermoleovorans
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3460 Geobacillus jurassicus str. DS1
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3540 Geobacillus thermoleovorans str. B23
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3763 Geobacillus stearothermophilus
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3836 Geobacillus stearothermophilus str. 46
Firmicutes Bacilli Bacillales Bacillaceae sf_1 385 Geobacillus stearothermophilus str. T10
Firmicutes Bacilli Bacillales Bacillaceae sf_1 462 Geobacillus thermodenitrificans str. DSM 466
Firmicutes Bacilli Bacillales Bacillaceae sf_1 571 Bacillus caldotenax str. DSM 406
Firmicutes Bacilli Bacillales Bacillaceae sf_1 829 Geobacillus sp. str. YMTC1049
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3635 Bacillus aeolius str. 4-1
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3827 Bacillus acidogenesis str. 105-2
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3845 hot synthetic compost clone pPD15
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3895 Bacillus sporothermodurans str. M215
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3283 Bacillus niacini str. IFO15566
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3439 Bacillus siralis str. 171544
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3589 Bacillus senegalensis str. RS8; CIP 106 669
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3650  
Firmicutes Bacilli Bacillales Bacillaceae sf_1 1050 Bacillus firmus CV93b
Firmicutes Bacilli Bacillales Bacillaceae sf_1 246 Bacillus sp. 6160m-C1
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3550 Bacillus megaterium str. QM B1551
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3345 Bacillus pumilus str. S9
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3328 Pseudobacillus carolinae
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3370 Bacillus sp. str. TGS437
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3492 Bacillus subtilis str. IAM 12118T
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3579 Bacillus sp. str. TGS750
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3675 Bacillus mojavensis str. M-1
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3706 Bacillus sonorensis str. NRRL B-23155
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3831 Bacillus licheniformis str. KL-068
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3900 Bacillus licheniformis str. DSM 13
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3909 Bacillus subtilis subsp. Marburg str. 168
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3918 Bacillus subtilis
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3467 Bacillus luciferensis str. LMG 18422
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3489 Bacillus silvestris str. SAFN-010
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3482 garbage compost isolate str. M32
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3383  
Firmicutes Bacilli Bacillales Bacillaceae sf_1 3517 Planococcus maritimus str. TF-9
Firmicutes Bacilli Lactobacillales Carnobacteriaceae sf_1 3536  
Firmicutes Bacilli Lactobacillales Carnobacteriaceae sf_1 3792 Carnobacterium sp. str. D35
Firmicutes Bacilli Bacillales Caryophanaceae sf_1 3285 Caryophanon latum str. DSM 14151
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 2764  
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 3021 Clostridium caminithermale str. DVird3
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 2915 Tepidibacter thalassicus str. SC 562
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 3049 Clostridium paradoxum str. DSM 7308T
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 3077 Clostridium glycolicum str. DSM 1288
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4156 MCB-contaminated groundwater-treating reactor clone RA9C1
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4173 termite gut homogenate clone Rs-D81 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4187 Clostridiales oral clone P4PB_122 P3
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4278 granular sludge clone R1p16
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4297  
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4300 termite gut clone Rs-060
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4310 termite gut clone Rs-056
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4364 oral endodontic infection clone MCE3_9
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4406 termite gut homogenate clone Rs-J39 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4477 termite gut homogenate clone Rs-N85 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4502  
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4584 Clostridium papyrosolvens str. DSM 2782
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4614 Clostridium sp. str. JC3
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4622 termite gut clone Rs-L36
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4638  
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4554 termite gut clone Rs-068
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4180 termite gut homogenate clone Rs-M23 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4225 termite gut clone Rs-116
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4265 termite gut homogenate clone Rs-N70 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4266 termite gut homogenate clone Rs-M86 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4272 termite gut homogenate clone Rs-M34 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4321 termite gut homogenate clone Rs-C76 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4357 Lachnospiraceae bacterium 19gly4
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4359 termite gut homogenate clone Rs-C69 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4369 termite gut homogenate clone Rs-N73 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4415 termite gut homogenate clone Rs-K32 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4418 termite gut homogenate clone Rs-H18 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4475 termite gut homogenate clone Rs-N02 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4507 termite gut homogenate clone Rs-N21 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4524 termite gut clone Rs-093
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4550 swine intestine clone p-320-a3
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4559 cow rumen clone BF30
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4566 swine intestine clone p-2657-65A5
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4582 swine intestine clone p-2600-9F5
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4627 termite gut homogenate clone Rs-A13 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4306 UASB reactor granular sludge clone PD-UASB-4 bacterium
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4607 Clostridium novyi str. NCTC538
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4229  
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4551 Clostridium acetobutylicum str. ATCC 824 (T)
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4339 Clostridium chauvoei str. ATCC 10092T
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4598 Clostridium sardiniense str. DSM 600
Firmicutes Clostridia Clostridiales Clostridiaceae sf_12 4169  
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3261 Enterococcus mundtii str. LMG 10748
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3288 Isolation and identification hyper-ammonia producing swine storage pits manure
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3298 Enterococcus saccharolyticus str. LMG 11427
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3318 Enterococcus ratti str. ATCC 700914
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3382  
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3392 Vagococcus lutrae str. m1134/97/1; CCUG 39187
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3433 Tetragenococcus muriaticus
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3598 Enterococcus solitarius str. DSM 5634
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3680 Melissococcus plutonius str. NCDO 2440
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3713 Enterococcus cecorum str. ATCC43198
Firmicutes Bacilli Lactobacillales Enterococcaceae sf_1 3881 Enterococcus dispar str. LMG 13521
Firmicutes Mollicutes Entomoplasmatales Entomoplasmataceae sf_1 4074 swine intestine clone p-2013-s959-5
Firmicutes Mollicutes Anaeroplasmatales Erysipelotrichaceae sf_3 3952 Erysipelothrix rhusiopathiae str. Pecs 56
Firmicutes Mollicutes Anaeroplasmatales Erysipelotrichaceae sf_3 3965 TCE-contaminated site clone ccslm238
Firmicutes Mollicutes Anaeroplasmatales Erysipelotrichaceae sf_3 3981 phototrophic sludge clone PSB-M-3
Firmicutes Mollicutes Anaeroplasmatales Erysipelotrichaceae sf_3 768  
Firmicutes Clostridia Clostridiales Eubacteriaceae sf_1 28 termite gut homogenate clone Rs-H81 bacterium
Firmicutes Bacilli Bacillales Halobacillaceae sf_1 3633 Bacillus clausii str. GMBAE 42
Firmicutes Bacilli Bacillales Halobacillaceae sf_1 3344 Halobacillus yeomjeoni str. MSS-402
Firmicutes Bacilli Bacillales Halobacillaceae sf_1 3488 Halobacillus salinus str. HSL-3
Firmicutes Bacilli Bacillales Halobacillaceae sf_1 3702 Amphibacillus xylanus str. DSM 6626
Firmicutes Bacilli Bacillales Halobacillaceae sf_1 3756 Salibacillus sp. str. YIM-kkny16
Firmicutes Bacilli Bacillales Halobacillaceae sf_1 3769 Gracilibacillus sp. str. YIM-kkny13
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2698 termite gut homogenate clone Rs-B88 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2804 Clostridium amygdalinum str. BR-10
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2961 termite gut homogenate clone Rs-F92 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 3042 swine intestine clone p-2876-6C5
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 3036 termite gut homogenate clone Rs-F27 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2668 termite gut homogenate clone Rs-G40 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 3017 termite gut homogenate clone Rs-D48 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 3076 Clostridium nexile
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2825 Butyrivibrio fibrisolvens str. LP1265
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2834 Butyrivibrio fibrisolvens str. OB156
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2844 Pseudobutyrivibrio ruminis str. pC-XS2
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 3059 Butyrivibrio fibrisolvens str. NCDO 2249
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2994 termite gut clone Rs-L15
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 3038 swine intestine clone p-1594-c5
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 3171 Lachnospira pectinoschiza
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2931 termite gut homogenate clone Rs-G77 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 3060 termite gut homogenate clone Rs-B14 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 3218 termite gut homogenate clone Rs-N53
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 2681 termite gut homogenate clone Rs-K41 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4212 termite gut clone Rs-061
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4273 termite gut homogenate clone Rs-M14 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4281 granular sludge clone UASB_brew_B86
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4315 termite gut homogenate clone Rs-N94 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4331 granular sludge clone UASB_brew_B84
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4335 termite gut homogenate clone Rs-N86 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4434 termite gut homogenate clone Rs-K11 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4510 termite gut homogenate clone Rs-Q53 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4511 ckncm314-B7-17 clone
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4512 granular sludge clone UASB_brew_B25
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4514 termite gut homogenate clone Rs-B34 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4533 termite gut homogenate clone Rs-N06 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4535 ckncm297-B1-1 clone
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4539 termite gut homogenate clone Rs-C61 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4540 termite gut homogenate clone Rs-M18 bacterium
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4567 human colonic clone HuCB5
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4571 Faecalibacterium prausnitzii str. ATCC 27766
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4613 rumen clone 3C0d-3
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4623 human colonic clone HuCA1
Firmicutes Clostridia Clostridiales Lachnospiraceae sf_5 4525 termite gut homogenate clone Rs-Q18 bacterium
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3330 Lactobacillus kitasatonis str. KM9212
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3342 Lactobacillus crispatus str. DSM 20584 T
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3478 Lactobacillus crispatus str. ATCC33197
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3490 Lactobacillus suntoryeus str. LH
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3618 Lactobacillus jensenii str. KC36b
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3696 Lactobacillus kalixensis str. Kx127A2; LMG 22115T; DSM 16043T; CCUG 48459T
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3395 Lactobacillus reuteri str. DSM 20016 T
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3547 Lactobacillus frumenti str. TMW 1.666
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3566 Lactobacillus pontis str. LTH 2587
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3798 Lactobacillus fermentum str. MD-9
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3521 Pediococcus inopinatus str. DSM 20285
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3885 Pediococcus pentosaceus
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3634 Lactobacillus letivazi str. JCL3994
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3767 Lactobacillus suebicus str. CECT 5917T
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3810 Lactobacillus brevis
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3829 Lactobacillus paralimentarius str. DSM 13238
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3366 Lactobacillus saerimneri str. GDA154 LMG 22087 DSM 16049 (T); CCUG 48462 (T)
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3418 Lactobacillus subsp. aviarius
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3703 Lactobacillus salivarius str. RA2115
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3914 Lactobacillus cypricasei str. LMK3
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3821 Lactobacillus casei
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3768 Lactobacillus perolens str. L532
Firmicutes Bacilli Lactobacillales Lactobacillaceae sf_1 3526 Lactobacillus sakei
Firmicutes Bacilli Lactobacillales Leuconostocaceae sf_1 3497 Weissella koreensis S-5673
Firmicutes Bacilli Lactobacillales Leuconostocaceae sf_1 3573 Leuconostoc ficulneum str. FS-1
Firmicutes Mollicutes Mycoplasmatales Mycoplasmataceae sf_1 3929 Mycoplasma gypsbengalensis str. Gb-V33
Firmicutes Mollicutes Mycoplasmatales Mycoplasmataceae sf_1 3997 Mycoplasma salivarium str. PG20(T)
Firmicutes Mollicutes Mycoplasmatales Mycoplasmataceae sf_1 4014 Mycoplasma pulmonis str. UAB CTIP
Firmicutes Bacilli Bacillales Paenibacillaceae sf_1 3415 Paenibacillus nematophilus str. NEM1b
Firmicutes Bacilli Bacillales Paenibacillaceae sf_1 3630  
Firmicutes Bacilli Bacillales Paenibacillaceae sf_1 3595 Paenibacillus sp. str. MB 2039
Firmicutes Bacilli Bacillales Paenibacillaceae sf_1 3299 Brevibacillus borstelensis str. LMG 15536
Firmicutes Bacilli Bacillales Paenibacillaceae sf_1 3641 Brevibacillus sp. MN 47.2a
Firmicutes Bacilli Bacillales Paenibacillaceae sf_1 319 Ammoniphilus oxalaticus str. RAOx-FF
Firmicutes Bacilli Bacillales Paenibacillaceae sf_1 625 Ammoniphilus oxalivorans str. RAOx-FS
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 304 Selenomonas ruminantium str.JCM6582
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 709 Selenomonas ruminantium str.S20
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 710 Centipeda periodontii str. HB-2
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 131 pig feces clone
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 181 Allisonella histaminiformans str. MR2
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 59 swine intestine clone p-1941-s962-3
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 940 Veillonella dispar str. DSM 20735
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 1036 Great Artesian Basin clone G07
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 428 chlorobenzene-degrading consortium clone IIIA-1
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 534 chlorobenzene-degrading consortium clone IIA-26
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 992 anoxic bulk soil flooded rice microcosm clone BSV43 clone
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 242 Desulfosporosinus orientis str. DSMZ 7493
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 300 benzene-contaminated groundwater clone ZZ12C8
Firmicutes Clostridia Clostridiales Peptococc/Acidaminococc sf_11 39 forested wetland clone RCP2-71
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2721 termite gut homogenate clone Rs-N71 bacterium
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2729 DCP-dechlorinating consortium clone SHA-58
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2679 termite gut homogenate clone BCf9-13
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2694 oral periodontitis clone FX028
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2714 termite gut homogenate clone Rs-N27 bacterium
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2913 termite gut homogenate clone Rs-N82 bacterium
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 3080 termite gut homogenate clone Rs-F43 bacterium
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 3112 Evry municipal wastewater treatment plant clone 012C11_B_SD_P15
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 3182 termite gut homogenate clone Rs-Q64 bacterium
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2993 oral clone P2PB_46 P3
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2738 Mogibacterium neglectum str. ATCC 700924 (= P9a-h)
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2805 oral periodontitis clone FX033
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 2797 Isolation and identification hyper-ammonia producing swine storage pits manure
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 619 TCE-dechlorinating microbial community clone 1G
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 224 Finegoldia magna str. ATCC 29328
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 58 Peptostreptococcus sp. str. E3_32
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 1037 Finegoldia magna
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 616 Peptoniphilus lacrimalis str. CCUG 31350
Firmicutes Clostridia Clostridiales Peptostreptococcaceae sf_5 393 Anaerococcus vaginalis str. CCUG 31349
Firmicutes Bacilli Bacillales Sporolactobacillaceae sf_1 3365 Bacillus sp. clone ML615J-19
Firmicutes Bacilli Bacillales Sporolactobacillaceae sf_1 3747 Bacillus sp. str. C-59-2
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3258 Staphylococcus auricularis str. MAFF911484 ATCC33753T
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3284  
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3545  
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3569 Staphylococcus saprophyticus
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3585  
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3592 Staphylococcus caprae str. DSM 20608
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3605  
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3628 Staphylococcus haemolyticus str. CCM2737
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3638 Staphylococcus sp str. AG-30
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3654 Staphylococcus pettenkoferi str. B3117
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3684 Staphylococcus sciuri
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3794  
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3822 Staphylococcus succinus str. SB72
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3494 Micrococcus luteus B-P 26
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3865 Macrococcus lamae str. CCM 4815
Firmicutes Bacilli Bacillales Staphylococcaceae sf_1 3432 deep-sea sediment isolate str. P_wp0225
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3722 Lactococcus Il1403 subsp. lactis str. IL1403
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3869 Streptococcus equi subsp. zooepidemicus str. Tokyo1291 subsp.
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3699 Streptococcus agalactiae str. 2603V/R
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3907 aortic heart valve patient with endocarditis clone v6
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3250 Streptococcus bovis str. B315
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3253 derived cheese sample clone 32CR
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3313 Streptococcus salivarius str. ATCC 7073
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3397 Streptococcus macedonicus str. ACA-DC 206 LAB617
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3422 Streptococcus thermophilus str. DSM 20617
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3543  
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3588 Streptococcus downei str. ATCC 33748
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3906 Streptococcus bovis str.ATCC 43143
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3499 Streptococcus constellatus str. ATCC27823
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3446 Streptococcus bovis str. HJ50
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3560 Streptococcus gallinaceus str. CCUG 42692
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3753 Streptococcus suis str. 8074
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3251 Streptococcus cristatus str. ATCC 51100
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3287 tongue dorsum scrapings clone FP015
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3290 Streptococcus mitis str. Sm91
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3629 Streptococcus mutans str. UA96
Firmicutes Bacilli Lactobacillales Streptococcaceae sf_1 3685 Streptococcus gordonii str. ATCC 10558
Firmicutes Clostridia Clostridiales Syntrophomonadaceae sf_5 2456 granular sludge clone R4b14
Firmicutes Bacilli Bacillales Thermoactinomycetaceae sf_1 3301 Thermoactinomyces sp. str. 700375
Firmicutes Unclassified Unclassified Unclassified sf_8 546 Ferribacter thermoautotrophicus
Firmicutes Clostridia Clostridiales Unclassified sf_17 2324  
Firmicutes Desulfotomaculum Unclassified Unclassified sf_1 2351 Desulfotomaculum thermobenzoicum str. DSM 6193
Firmicutes Desulfotomaculum Unclassified Unclassified sf_1 2359 UASB granular sludge clone JP
Firmicutes Clostridia Unclassified Unclassified sf_3 2373  
Firmicutes Symbiobacteria Symbiobacterales Unclassified sf_1 2388 G+C Gram-positive clone YNPRH70A
Firmicutes Unclassified Unclassified Unclassified sf_8 2433 Ferribacter thermoautotrophicus str. JW/JH-Fiji-2
Firmicutes Desulfotomaculum Unclassified Unclassified sf_1 2443 Desulfotomaculum thermoacetoxidans str. DSM 5813
Firmicutes Desulfotomaculum Unclassified Unclassified sf_1 2490 Desulfotomaculum solfataricum str. V21
Firmicutes Clostridia Unclassified Unclassified sf_4 2398 deep marine sediment clone MB-C2-106
Firmicutes Symbiobacteria Symbiobacterales Unclassified sf_1 77 thermal soil clone YNPFFP9
Firmicutes Clostridia Clostridiales Unclassified sf_17 926  
Firmicutes Desulfotomaculum Unclassified Unclassified sf_1 198 Pelotomaculum sp. str. JT
Firmicutes Catabacter Unclassified Unclassified sf_4 2716 termite gut homogenate clone Rs-F76 bacterium
Firmicutes Clostridia Clostridiales Unclassified sf_17 3476  
Firmicutes Bacilli Lactobacillales Unclassified sf_1 3289 Isobaculum melis CCUG 37660T
Firmicutes Bacilli Lactobacillales Unclassified sf_1 3481  
Firmicutes Clostridia Clostridiales Unclassified sf_17 4168  
Firmicutes Catabacter Unclassified Unclassified sf_4 4503 termite gut homogenate clone Rs-H83 bacterium
Firmicutes Unclassified Unclassified Unclassified sf_8 4536 Mono Lake at depth 35m station 6 July 2000 clone ML635J-14 G+C
Firmicutes Clostridia Unclassified Unclassified sf_7 4216  
Firmicutes Catabacter Unclassified Unclassified sf_1 4261 termite gut homogenate clone Rs-G04 bacterium
Firmicutes Catabacter Unclassified Unclassified sf_1 4293 termite gut homogenate clone Rs-Q01 bacterium
Firmicutes gut clone group Unclassified Unclassified sf_1 4298 human mouth clone P4PA_66
Firmicutes Clostridia Clostridiales Unclassified sf_17 4307  
Firmicutes Catabacter Unclassified Unclassified sf_4 4526 TCE-contaminated site clone ccslm210
Firmicutes gut clone group Unclassified Unclassified sf_1 4616 rumen clone F23-C12
Fusobacteria Fusobacteria Fusobacterales Fusobacteriaceae sf_3 367 Leptotrichia amnionii str. AMN-1
Fusobacteria Fusobacteria Fusobacterales Fusobacteriaceae sf_3 558 Sneathia sanguinegens str. CCUG 41628T
Fusobacteria Fusobacteria Fusobacterales Fusobacteriaceae sf_1 488 Fusobacterium nucleatum subsp. vincentii str. ATCC 49256
Gemmatimonadetes Unclassified Unclassified Unclassified sf_5 442 forest soil clone S0134
Gemmatimonadetes Unclassified Unclassified Unclassified sf_5 227 uranium mining waste pile clone JG37-AG-36
Gemmatimonadetes Unclassified Unclassified Unclassified sf_5 9464 lodgepole pine rhizosphere soil British Columbia Ministry Forests Long-Term Soil Productivity
Gemmatimonadetes Unclassified Unclassified Unclassified sf_5 10112 forest soil clone NOS7.157WL
Gemmatimonadetes Unclassified Unclassified Unclassified sf_5 317 penguin droppings sediments clone KD8-87
Gemmatimonadetes Unclassified Unclassified Unclassified sf_5 1127 uranium mining waste pile near Johanngeorgenstadt soil clone JG37-AG-21
Gemmatimonadetes Unclassified Unclassified Unclassified sf_5 1565 uranium mining waste pile clone JG34-KF-418
Gemmatimonadetes Unclassified Unclassified Unclassified sf_5 2047 soil clone #0319-7G21
LD1PA group Unclassified Unclassified Unclassified sf_1 10118 anoxic marine sediment clone LD1-PA38
Lentisphaerae Unclassified Unclassified Unclassified sf_5 10027 Cytophaga sp. str. Dex80-43
Lentisphaerae Unclassified Unclassified Unclassified sf_5 10330 Mono lake clone ML635J-58
Lentisphaerae Unclassified Unclassified Unclassified sf_5 9704 Cytophaga sp. str. Dex80-64
marine group A mgA-2 Unclassified Unclassified sf_1 6344 bacterioplankton clone ZA3648c
marine group A mgA-1 Unclassified Unclassified sf_1 6408 Sargasso Sea
marine group A mgA-1 Unclassified Unclassified sf_1 6454 marine clone SAR406
Natronoanaerobium Unclassified Unclassified Unclassified sf_1 769 fjord ikaite column clone un-c23
Natronoanaerobium Unclassified Unclassified Unclassified sf_1 2437 Mono Lake at depth 23m station 6 July 2000 clone ML623J-19
Natronoanaerobium Unclassified Unclassified Unclassified sf_1 3570 Bacillus sp. clone ML1228J-1
Natronoanaerobium Unclassified Unclassified Unclassified sf_1 3745 Mono Lake at depth 35m station 6 July 2000 clone ML635J-45
Natronoanaerobium Unclassified Unclassified Unclassified sf_1 4377 Mono Lake at depth 35m station 6 July 2000 clone ML635J-65 G+C
NC10 NC10-1 Unclassified Unclassified sf_1 452 vadose clone 5G01
NC10 NC10-1 Unclassified Unclassified sf_1 536 uranium mill tailings clone GuBH2-AD-8
NC10 NC10-2 Unclassified Unclassified sf_1 10254 uranium mill tailings soil sample clone Sh765B-TzT-35
Nitrospira Nitrospira Nitrospirales Nitrospiraceae sf_1 984 uranium mining waste pile clone JG37-AG-131 sp.
Nitrospira Nitrospira Nitrospirales Nitrospiraceae sf_2 542 forested wetland clone FW19
Nitrospira Nitrospira Nitrospirales Nitrospiraceae sf_2 544 forested wetland clone FW5
Nitrospira Nitrospira Nitrospirales Nitrospiraceae sf_2 697 forested wetland clone FW118
OP10 CH21 cluster Unclassified Unclassified sf_1 326 geothermal clone ST01-SN3H
OP10 Unclassified Unclassified Unclassified sf_4 484 forested wetland clone FW68
OP10 CH21 cluster Unclassified Unclassified sf_1 514 sludge clone SBRA136
OP10 Unclassified Unclassified Unclassified sf_5 9782 Rocky Mountain alpine soil clone S1a-1H
OP3 Unclassified Unclassified Unclassified sf_4 628 CB-contaminated groundwater clone GOUTB15
OP3 Unclassified Unclassified Unclassified sf_2 349 soil clone PBS-25
OP9/JS1 OP9 Unclassified Unclassified sf_1 726 hot spring clone OPB72
OP9/JS1 OP9 Unclassified Unclassified sf_1 969 DCP-dechlorinating consortium clone SHA-1
phylum_tax class_tax order_tax family_tax subfamily otu_id rep_prokMSAname
Planctomycetes Planctomycetacia Planctomycetales Anammoxales sf_2 4683 anoxic basin clone CY0ARA028B09
Planctomycetes Planctomycetacia Planctomycetales Anammoxales sf_4 4694 USA: Colorado Fort collins Horsetooth Reservoir clone HT2F11
Planctomycetes Planctomycetacia Planctomycetales Anammoxales sf_4 9662 Great Artesian Basin clone B83
Planctomycetes Planctomycetacia Planctomycetales Pirellulae sf_3 4670  
Planctomycetes Planctomycetacia Planctomycetales Pirellulae sf_3 4677 aerobic basin clone CY0ARA032A03
Planctomycetes Planctomycetacia Planctomycetales Planctomycetaceae sf_3 4652 anoxic basin clone CY0ARA028C04
Planctomycetes Planctomycetacia Planctomycetales Planctomycetaceae sf_3 4948 anoxic basin clone CY0ARA027D01
Proteobacteria Alphaproteobacteria Acetobacterales Acetobacteraceae sf_1 7529 Gluconacetobacter europaeus str. ZIM B028 V3
Proteobacteria Gammaproteobacteria Acidithiobacillales Acidithiobacillaceae sf_1 8320 acid mine drainage clone BA11
Proteobacteria Gammaproteobacteria Acidithiobacillales Acidithiobacillaceae sf_1 8552 Acidithiobacillus ferrooxidans str. D2
Proteobacteria Gammaproteobacteria Acidithiobacillales Acidithiobacillaceae sf_1 9224 Acidithiobacillus albertensis str. DSM 14366
Proteobacteria Gammaproteobacteria Acidithiobacillales Acidithiobacillaceae sf_1 9497 Acidithiobacillus ferrooxidans str. ATCC 19859
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae sf_1 9294 Arctic deep sea Isolation common chemoorganotrophic oxygen-respiring polar current d 1210
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae sf_1 8340 Aeromonas ichthiosmia
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae sf_1 8364 Aeromonas allosaccharophila str. CECT 4199
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae sf_1 8621 Aeromonas sp. PAR2A
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae sf_1 9000 Aeromonas culicicola str. MTCC 3249
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae sf_1 9026 Haemophilus piscium str. NCIMB 1952
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae sf_1 9440 Aeromonas sobria str. NCIMB 12065
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae sf_1 9494 Aeromonas molluscorum str. 849T
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 7737 atrazine-catabolizing microbial presence methanol clone KRA30+06A
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 7768 swine intestine clone p-861-a5
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 7788 atrazine-catabolizing microbial absence methanol clone KRA30-58
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 7838 Alcaligenes defragrans str. PD-19
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 7902 Alcaligenes faecalis str. M3A
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 7932 Achromobacter subsp. denitrificans str. DSM 30026 (T)
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 7984 Waste-gas biofilter clone BIfciii38
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 7992 Alcaligenes faecalis 5659-H
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 8062 Brackiella oedipodis str. LMG 1945 R8846
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae sf_1 8094 Alcaligenes sp. str. VKM B-2263 dcm6
Proteobacteria Gammaproteobacteria Oceanospirillales Alcanivoraceae sf_1 8335 Alcanivorax sp. str. K3-3 (MBIC 4323)
Proteobacteria Gammaproteobacteria Oceanospirillales Alcanivoraceae sf_1 9658 Alcanivorax sp. str. Haw1
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9035 Microbulbifer sp. str. JAMB-A94
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8348 Arctic sea ice ARK10038
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8484 Alteromonadaceae isolate str. LA50
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8503 Arctic sea ice ARK10244
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8578 Marinobacter lipolyticus str. SM-19
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8594 Marinobacter sp. str. SBS
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9239 Arctic sea ice ARK10228
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8196  
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8222  
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8600 Colwellia piezophila str. Y223G
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8753 Idiomarina loihiensis str. GSP37
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8174 attached marine recovered surface clone 17 proteobacterium
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8318 Aestuariibacter salexigens str. JC2042
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8374 Agarivorans albus str. MKT 89
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8533  
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8695 Arctic pack ice; northern Fram Strait; 80 31.1 N; 01 deg 59.7 min E clone ARKIA-34
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8863 Alteromonas marina str. SW-47
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8970 Arctic seawater isolate str. R9879
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8978 Arctic sea ice ARK10108
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9230 Antarctic pack ice Lasarev Sea Southern Ocean clone ANTXI/4_14-62 sea
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9236 attached marine recovered surface clone 18 proteobacterium
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9288 Alteromonas stellipolaris str. LMG 21861
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9292  
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9501 sea water isolate str. BP-PH
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9562 Alteromonadaceae clone PH-B55N
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8172 Pseudoalteromonas sp. str. Bdeep-1
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8336 Alteromonas sp. str. MS23
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8580 Arctic seawater isolate str. R7076
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8932 Pseudoalteromonas antarctica str. N-1
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8975 Alteromonas sp. str. NIBH P1M3
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9058 Pseudoalteromonas carrageenovora str. ATCC 12662T
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9111 Pseudoalteromonas sp. str. E36
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9143 Pseudoalteromonas agarivorans str. KMM 255
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9205 marine clone Arctic96B-17
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9218 Pseudoalteromonas haloplanktis str. ATCC 14393
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9324 Pseudoalteromonas ruthenica str. KMM300
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9386 Alteromonas sp. str. NIBH P2M11
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9640 exposed to diatom detritus isolate str. Tw-10 Tw-10
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8643 Pseudoalteromonas porphyrae str. S2-65
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9369 Pseudoalteromonas luteoviolacea str. NCIMB 1893T
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9222 Shewanella hanedai str. CIP 103207T
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9384 Moritella viscosa str. NVI 88/478T
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8916 Shewanella algae str. 43940
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9067 Shewanella algae str. ACM 4733
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9416 marine isolate str. R8
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 9586 Shewanella gaetbuli str. TF-27
Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae sf_1 8579 Psychromonas profunda str. 2825
Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae sf_3 6628 Wolbachia pipientis
Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae sf_3 6648 Wolbachia sp
Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae sf_3 6803 Wolbachia sp. Dlem16SWol
Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae sf_3 6908 Rhinocyllus conicus endosymbiont
Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae sf_3 7481 Wolbachia pipientis
Proteobacteria Alphaproteobacteria Rhizobiales Bartonellaceae sf_1 7056 Bartonella schoenbuchensis str. R1
Proteobacteria Alphaproteobacteria Rhizobiales Bartonellaceae sf_1 7384 aortic heart valve patient with endocarditis clone v9
Proteobacteria Alphaproteobacteria Rhizobiales Bartonellaceae sf_1 7415 Bartonella quintana str. Toulouse
Proteobacteria Alphaproteobacteria Rhizobiales Bartonellaceae sf_1 7634 Bartonella henselae str. Houston-1
Proteobacteria Deltaproteobacteria Bdellovibrionales Bdellovibrionaceae sf_1 10010 uranium mining waste pile clone JG37-AG-139 proteobacterium
Proteobacteria Alphaproteobacteria Bradyrhizobiales Beijerinck/Rhodoplan/Methylocyst sf_3 7401 Scrippsiella trochoidea NEPCC 15
Proteobacteria Alphaproteobacteria Bradyrhizobiales Beijerinck/Rhodoplan/Methylocyst sf_3 6651 Beijerinckia indica
Proteobacteria Alphaproteobacteria Bradyrhizobiales Beijerinck/Rhodoplan/Methylocyst sf_3 7275 Mammoth cave clone CCU18
Proteobacteria Alphaproteobacteria Bradyrhizobiales Beijerinck/Rhodoplan/Methylocyst sf_3 7219 Methylosinus sporium
Proteobacteria Alphaproteobacteria Bradyrhizobiales Beijerinck/Rhodoplan/Methylocyst sf_3 7640 Methylosinus trichosporium
Proteobacteria Alphaproteobacteria Bradyrhizobiales Beijerinck/Rhodoplan/Methylocyst sf_3 6762 acidic forest soil clone UP8
Proteobacteria Alphaproteobacteria Bradyrhizobiales Beijerinck/Rhodoplan/Methylocyst sf_3 7153 Methylocella tundrae str. Y1
Proteobacteria Alphaproteobacteria Rhizobiales Bradyrhizobiaceae sf_1 7029  
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7403 Oligotropha carboxidovorans str. S23
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 6927 Nitrobacter hamburgensis str. X14
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 6768 Rhodopseudomonas palustris str. GH
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 6799 Rhodopseudomonas palustris str. ATCC 17001
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7316  
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7333 Afipia genosp. 4 str. G3644
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 6941 Rhodopseudomonas rhenobacensis str. Klemme Rb
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7087 Bradyrhizobium japonicum HA1
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7398 Bradyrhizobium japonicum str. USDA 38
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 6636 Bradyrhizobium elkanii str. USDA 76
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 6867 heavy metal-contaminated soil clone a13131
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 6887 Bradyrhizobium str. YB2
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7044 Afipia genosp. 2 str. G4438
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7126 ground water deep-well injection disposal site radioactive wastes Tomsk-7 clone S15A-MN96 proteobacterium
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7390 Afipia genosp. 10 str. G8996
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7477 Bradyrhizobium elkanii str. SEMIA 6028
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7522 Bradyrhizobium sp. str. KKI14
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 6878 Bradyrhizobium japonicum SD5
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 6917 Bradyrhizobium japonicum str. IAM 12608
Proteobacteria Alphaproteobacteria Bradyrhizobiales Bradyrhizobiaceae sf_1 7353 temperate estuarine mud clone HC65
Proteobacteria Alphaproteobacteria Rhizobiales Brucellaceae sf_1 6757 Ochrobactrum anthropi str. ESC1
Proteobacteria Alphaproteobacteria Rhizobiales Brucellaceae sf_1 6981 Ochrobactrum gallinifaecis str. Iso 196
Proteobacteria Alphaproteobacteria Rhizobiales Brucellaceae sf_1 6995  
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae sf_1 7720 penguin droppings sediments clone KD1-79
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae sf_1 7771 Burkholderia glathei str. ATCC 29195T
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae sf_1 7782 Burkholderia hospita str. LMG 20598T
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae sf_1 7969 Burkholderia sp.
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae sf_1 8059 Burkholderia caribensis str. MWAP71
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae sf_1 8068 Burkholderia caryophylli str. ATCC 25418
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae sf_1 7747  
Proteobacteria Alphaproteobacteria Consistiales Caedibacteraceae sf_4 7157 acid mine drainage clone ASL45
Proteobacteria Alphaproteobacteria Consistiales Caedibacteraceae sf_5 6947 termite gut homogenate clone Rs-B60 proteobacterium
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10446  
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10461 deepest cold-seep area Japan Trench clone JTB360 proteobacterium
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10523 Riftia pachyptila's tube clone R103-B70
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10538 Arcobacter cryaerophilus
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10447 Sulfurospirillum deleyianum str. Spirillum 5175
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10464 Campylobacter sp. str. NO2B
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10434 Campylobacter gracilis
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10456 Campylobacter showae
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10463 Campylobacter subsp. fetus
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10484 Campylobacter helveticus
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae sf_3 10540 Campylobacter showae str. LMG 12636
Proteobacteria Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae sf_1 8536 Cardiobacterium hominis
Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae sf_1 7486 Asticcacaulis excentricus str. ATCC15261
Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae sf_1 6781 Brevundimonas intermedia str. MBIC2712 ATCC15262
Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae sf_1 6904 Brevundimonas vesicularis str. IAM 12105T
Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae sf_1 6909 Brevundimonas diminuta str. DSM 1635
Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae sf_1 6968 Brevundimonas diminuta str. IAM 12691T
Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae sf_1 7359 Brevundimonas bacteroides str. CB7
Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae sf_1 7366 Brevundimonas subvibrioides str. CB81
Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae sf_1 7436 Brevundimonas sp. str. FWC40
Proteobacteria Gammaproteobacteria Chromatiales Chromatiaceae sf_1 9048 Allochromatium sp. AT2202
Proteobacteria Gammaproteobacteria Chromatiales Chromatiaceae sf_1 8546 Thiocapsa litoralis
Proteobacteria Gammaproteobacteria Chromatiales Chromatiaceae sf_1 8527  
Proteobacteria Gammaproteobacteria Chromatiales Chromatiaceae sf_1 8697 Thiococcus sp. AT2204
Proteobacteria Gammaproteobacteria Chromatiales Chromatiaceae sf_1 9054  
Proteobacteria Gammaproteobacteria Chromatiales Chromatiaceae sf_1 9052  
Proteobacteria Gammaproteobacteria Chromatiales Chromatiaceae sf_1 9356  
Proteobacteria Gammaproteobacteria Chromatiales Chromatiaceae sf_1 9370 isolate str. HTB019
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8112 Comamonas testosteroni str. SMCC B329
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7704 freshwater clone PRD01b009B
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7705 penguin droppings sediments clone KD4-7
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7801 Toolik Lake main station at 3 m depth clone TLM05/TLMdgge10 proteobacterium
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7829 Xylophilus ampelinus str. ATCC 33914
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7928 penguin droppings sediments clone KD5-43
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7941 MCB-contaminated groundwater-treating reactor clone RB9C10
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7986 Arctic sea ice ARK10281
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8138 Pseudomonas lanceolata str. ATCC 14669T
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8139 Delftia tsuruhatensis str. AD9
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7856 Variovorax paradoxus
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7964 napthalene-contaminated sediment clone 76
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7888 Hydrogenophaga flava str. DSM 619T
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7919 strain isolate str. rM4
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7987 Acidovorax sp. str. OS-6
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8012 Acidovorax konjaci str. DSM 7481
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8018 Acidovorax delafieldii str. ATCC 17505
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8021 Acidovorax facilis str. CCUG 2113
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8022 Acidovorax avenae subsp. cattleyae str. NCPPB 961 subsp.
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8031 strain isolate str. rJ10
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8046 Acidovorax defluvii str. BSB411
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 8152 nephridia Octolasion lacteum clone Ol2-2
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7807 Aquaspirillum metamorphum str. DSM 1837
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7884 Germany:Elbe River clone Elb37
Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae sf_1 7965 Anoxobacterium dechloraticum
Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae sf_3 7893 agricultural soil clone SC-I-71
Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae sf_3 8457 5' clone CHAB-XI-27
Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae sf_3 9198 uranium mining waste pile clone KF-JG30-B15 KF-JG30-B15
Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae sf_3 8969 uranium mining waste pile soil sample clone JG30-KF-C15 proteobacterium
Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae sf_3 9444 forested wetland clone FW23
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfoarculaceae sf_2 10227 marine sediment clone Bol11
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 9666 marine sediment above hydrate ridge clone Hyd89-13 proteobacterium
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 9875 hydrothermal sediment clone AF420354
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 9800 forested wetland clone FW57
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 10268  
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 10046 Desulfobacterium cetonicum str. DSM 7267 oil recovery water
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 10239  
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 10319 sulfate-reducing habitat clone SLM-CP-116
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 10031 Antarctic sediment clone SB1_49
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 10083 Desulfobacter curvatus str. DSM 3379
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae sf_5 9940 Antarctic sediment clone SB2_56
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobulbaceae sf_1 10047 epibiontic clone C11-D3
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobulbaceae sf_1 10187 Mono Lake at depth 23 m station 6 July 2000 clone ML623J-57 proteobacterium
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobulbaceae sf_1 9734 Riftia pachyptila's tube clone R103-B13
Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobulbaceae sf_1 9739 gas hydrate clone Hyd89-51
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfohalobiaceae sf_1 9894 Desulfonauticus submarinus str. 6N
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfomicrobiaceae sf_1 10079 Desulfomicrobium baculatum str. DSM 1742
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae sf_1 10262 Desulfovibrio sp. str. Ac5.2
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae sf_1 10248 Desulfovibrio giganteus str. DSM 4370
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae sf_1 10016 termite gut homogenate clone Rs-N35 proteobacterium
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae sf_1 9826 termite gut homogenate clone Rs-M72 proteobacterium
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae sf_1 10071 Desulfovibrio desulfuricans
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae sf_1 10212  
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae sf_1 9709 termite gut homogenate clone Rs-N31 proteobacterium
Proteobacteria Deltaproteobacteria Desulfuromonadales Desulfuromonaceae sf_1 10020 uranium mill tailings soil sample clone GuBH2-AG-114 proteobacterium
Proteobacteria Gammaproteobacteria Chromatiales Ectothiorhodospiraceae sf_1 9450 Halorhodospira neutrophila str. SG 3304
Proteobacteria Gammaproteobacteria Chromatiales Ectothiorhodospiraceae sf_1 9598 Mono Lake at depth 2 m station 6 July 2000 clone ML602J-47 proteobacterium
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_6 433 coal effluent wetland clone RCP2-6
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_6 646 Opitutus sp. str. SA-9
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9309 Buchnera sp
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8742 USA:New York isolate str. KN4
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_6 8783 Alterococcus agarolyticus str. ADT3; CCRC17102
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9135 intestine Zophobas mori clone
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9358 Salmonella subsp. enterica serovar Waycross str. Swy1 subsp.
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9496  
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8886 Salmonella typhimurium LT2 str. SGSC1412
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8740 Erwinia chrysanthemi str. 573
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9651 Pectobacterium subsp. atrosepticum str. GSPB 1710
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8379 Erwinia amylovora EA G-5
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9142 Erwinia amylovora str. DSM 30165
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9252 Pantoea cedenensis str. A34
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9345 Erwinia amylovora str. BC199(= Ea528)
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8554 Kluyvera ascorbata 69
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8885 Morganella morganii str. AP28
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9363 Citrobacter freundii str. CDC 621-64
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9594 Morganella morganii str. ATCC35200
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8758 Pectobacterium cypripedii str. ATCC 29267
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8282 Antonina pretiosa symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8693 Pantoea agglomerans str. A40
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8700 Baumannia cicadellinicola
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9302 Pantoea subsp. stewartii str. GSPB 2626
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8236 Vryburgia amaryllidis symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8504 Dysmicoccus neobrevipes symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8603 Melanococcus albizziae symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8607 Amonostherium lichtensioides symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8624 Erium globosum symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9290 Baumannia cicadellinicola
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9293 USA clone 14/7
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9420  
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8934 Pectobacterium subsp. carotovorum str. E155 subsp.
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9266 Parasite BEV of E.variegatus
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8467 Serratia marcescens subsp. sakuensis str. KRED subsp.
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9348  
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8505 Buttiauxella warmboldiae str. DSM 9404
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8528 Enterobacter cloacae Nr. 3
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8530 Enterobacteriaceae CF01Ent-1
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8640  
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8936 Klebsiella oxytoca str. ChDC OS31
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9060 Enterobacter ludwigii str. EN-119 = DSMZ 16688
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9274 Enterobacter sp. CC1
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9361 Enterobacter intermedius str. JCM1238
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9390 Enterobacter nimipressuralis str. LMG 10245-T
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8251 Nitrogen-fixing isolate str. CANF3
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8529 Raoultella planticola 7
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8627 Australicoccus grevilleae symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8770  
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8890 Raoultella planticola str. DR3
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8362 Klebsiella pneumoniae str. ASR1
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8510 Klebsiella pneumoniae str. DSM 30104
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8773  
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8286 Cyphonococcus alpinus symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8711 Serratia odorifera str. DSM 4582
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8712 Serratia proteamaculans str. DSM 4543
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8739 Serratia entomophila str. DSM 12358
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8892 Aranicola proteolyticus
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9151  
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9417 Serratia fonticola str. DSM 4576
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8631 Planococcus ficus symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8283 Heteropsylla texana symbiont
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8173 Photorhabdus asymbiotica str. ATCC 43949
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8225  
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8642 Erwinia chrysanthemi str. 580
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9029 Photorhabdus asymbiotica subsp. australis str. MB
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8473 Hafnia alvei
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9265 Rahnella aquatilis k 8
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9337 Rahnella genosp. 3 str. DSM 30078
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 8564 Rahnella aquatilis str. ATCC 33989
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9157 Secondary symbiont type-U Acyrthosiphon pisum (rrs) clone 5B type-U
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 9262 Yersinia aldovae str. A125
Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae sf_1 1206 Dermacentor variabilis symbiont
Proteobacteria Gammaproteobacteria Thiotrichales Francisellaceae sf_1 9554 Tilapia parasite TPT-541
Proteobacteria Gammaproteobacteria Thiotrichales Francisellaceae sf_1 8949 Caedibacter taeniospiralis
Proteobacteria Deltaproteobacteria Desulfuromonadales Geobacteraceae sf_1 482 trichloroethene-contaminated site clone FTLM205 proteobacterium
Proteobacteria Deltaproteobacteria Desulfuromonadales Geobacteraceae sf_1 10171  
Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae sf_1 8514 Chromohalobacter israelensis str. ATCC 43985 T
Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae sf_1 8562 Halomonas sp. str. TNB I20
Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae sf_1 8576 Halomonas sp. Ko502
Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae sf_1 8598 Halomonas desiderata str. FB2
Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae sf_1 8854 Halomonas variabilis str. ANT9112
Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae sf_1 9471 Boston Harbor surface water isolate str. UMB18C UMB18C
Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae sf_1 9141 Halomonas sp. SK1
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10385  
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10428 Flexispira rappini FH 9702248
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10430 Helicobacter heilmannii str. MM2
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10436 Helicobacter aurati str. MIT 97-5075c
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10442 Helicobacter cetorum str. MIT 99-5656
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10444 Helicobacter suncus str. Kaz-2
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10448 Helicobacter felis str. Dog-1
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10451 Helicobacter heilmannii str. C4S
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10454 Helicobacter pullorum str. NCTC 12826
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10462 Helicobacter rodentium str. MIT 96-1312
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10518 Helicobacter pylori str. ATCC 49396T
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10520 Helicobacter sp. blood isolate 964
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10548 Helicobacter rappini W.Tee-Bat
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10552 Helicobacter winghamensis str. NLEP 97-1611
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10562 Helicobacter rappini W.Tee-Yu
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10425 Sulfurimonas autotrophica str. OK5
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10411 termite gut homogenate clone Rs-P71 proteobacterium
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10432 Riftia pachyptila's tube clone R76-B51
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10438 hydrocarbon seep clone GCA014
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10590 termite gut homogenate clone Rs-H40 proteobacterium
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10614 strain isolate str. BHI80-49
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10417 temperate estuarine mud clone KM61
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10467  
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae sf_3 10507 termite gut homogenate clone Rs-M59 proteobacterium
Proteobacteria Alphaproteobacteria Bradyrhizobiales Hyphomicrobiaceae sf_1 7646 Hyphomicrobium aestuarii str. DSM 1564
Proteobacteria Alphaproteobacteria Rhizobiales Hyphomicrobiaceae sf_1 7392  
Proteobacteria Gammaproteobacteria Legionellales Legionellaceae sf_1 8865 Arctic pack ice; northern Fram Strait; 80 31.1 N; 01 deg 59.7 min E clone ARKCH2Br2-23
Proteobacteria Alphaproteobacteria Azospirillales Magnetospirillaceae sf_1 6922 Dechlorospirillum sp. str. SN1
Proteobacteria Alphaproteobacteria Bradyrhizobiales Methylobacteriaceae sf_1 7585 Methylobacterium thiocyanatum str. ALL/SCN-P
Proteobacteria Gammaproteobacteria Methylococcales Methylococcaceae sf_1 8243 isolate str. IR
Proteobacteria Gammaproteobacteria Methylococcales Methylococcaceae sf_1 8821 Methylobacter psychrophilus str. Z-0021
Proteobacteria Gammaproteobacteria Methylococcales Methylococcaceae sf_1 9438 marine sediment above hydrate ridge clone Hyd24-01 proteobacterium
Proteobacteria Betaproteobacteria Methylophilales Methylophilaceae sf_1 8137 freshwater clone PRD01a011B
Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae sf_3 8366 Psychrobacter frigidicola str. DSM 12411
Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae sf_3 8604 Moraxella oblonga str. IAM 14971
Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae sf_3 8838 Psychrobacter psychrophilus CMS 28
Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae sf_3 8727 Alkanindiges hongkongensis str. HKU9
Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae sf_3 9359 Acinetobacter junii str. S33
Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae sf_3 9428 hydrocarbon-degrading consortium clone AF2-1D
Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae sf_3 9466 Acinetobacter tandoii str. 4N13
Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae sf_3 9641 Acinetobacter haemolyticus
Proteobacteria Deltaproteobacteria Myxococcales Myxococcaceae sf_1 10358 Myxococcus fulvus str. Mx f2
Proteobacteria Epsilonproteobacteria Nautiliales Nautiliaceae sf_1 10477 S17sBac5 complete clone
Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae sf_1 7945 Aquaspirillum serpens str. IAM 13944
Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae sf_1 7675 Neisseria sp. str. CCUG 46910
Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae sf_1 7662 Mars Odyssey Orbiter and encapsulation facility clone T5-1 sp.
Proteobacteria Betaproteobacteria Nitrosomonadales Nitrosomonadaceae sf_1 7789  
Proteobacteria Betaproteobacteria Nitrosomonadales Nitrosomonadaceae sf_1 7976 Nitrosomonas sp. str. Nm86
Proteobacteria Betaproteobacteria Nitrosomonadales Nitrosomonadaceae sf_1 7770 Nitrosomonas europaea str. ATCC 19718
Proteobacteria Betaproteobacteria Nitrosomonadales Nitrosomonadaceae sf_1 8145 Nitrosomonas eutropha str. Nm57
Proteobacteria Deltaproteobacteria Desulfobacterales Nitrospinaceae sf_2 594 uranium mining mill tailing clone GR-296.II.52 GR-296.I.52
Proteobacteria Gammaproteobacteria Oceanospirillales Oceanospirillaceae sf_1 9351 bacterioplankton clone ZA2333c
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 7743 Herbaspirillum sp. str. NAH4
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 7843 Massilia timonae timone
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 7845 Diaphorina citri symbiont
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 7866 Paucimonas lemoignei str. ATCC 17989T
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 7878 napthalene-contaminated sediment clone 29
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 7921 Collimonas fungivorans str. Ter331
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 7968 Oxalobacter formigenes str. OXB ovinen rumen
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 8013 isolate str. A1020
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 8032 Aquaspirillum arcticum str. IAM 14963
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 8034 Janthinobacterium agaricidamnosum str. W1r3T
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae sf_1 8058 Herbaspirillum seropedicae str. DSM 6445 ATCC 35892
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 9360 Pasteurella multocida subsp. gallicida str. MCCM 00021 subsp.
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 9349 Pasteurella sp. str. 91985
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8195 Haemophilus influenzae str. R2866
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8555 Haemophilus influenzae str. M9741
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 9213 Haemophilus quentini str. MCCM 02026
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 9477 Haemophilus influenzae str. M11105
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8228 Actinobacillus indolicus str. H1419
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8861 Haemophilus parasuis 427
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8614 Acidithiobacillus thiooxidans str. KCTC 8928P
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8952 Actinobacillus lignieresii
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 9263 Actinobacillus capsulatus
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8876 Mannheimia sp. R19.2 str. R19.2; CCUG 38463 R19.2
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 9237  
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8409 human colonic mucosal biopsy clone ABLCf1
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8432  
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 8848 str. 86355
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 9533 Haemophilus segnis str. MCCM 00337
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae sf_1 9628 Histophilus somni str. CCUG 12839
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 6857 Mesorhizobium mediterraneum str. PECA20
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 6692 Phyllobacterium trifolii str. PETP02
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 6916 lake microbial mat isolate str. R-9219
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 6966 Mesorhizobium tianshanense str. -1BS; USDA 3592
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 7009  
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 7216 Ahrensia kielensis str. IAM12618
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 7379 Phyllobacterium myrsinacearum HM35
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 7381 Aminobacter aminovorans str. DSM7048T
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 7497 Pseudaminobacter salicylatoxidans str. KTC001
Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae sf_1 7300 marine isolate JP57
Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae sf_3 8664 Thiomicrospira sp. str. Milos-T2
Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae sf_3 9027 Thiomicrospira crunogena str. XCL-2
Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae sf_3 9557 Riftia pachyptila's tube clone R76-B23
Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae sf_3 9291 Methylophaga alcalica str. M39
Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae sf_3 9392 Methylophaga sp. str. V4.ME.29 = MM_2343
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_3 10249 soil sample uranium mining waste pile near town Johanngeorgenstadt clone JG36-TzT-168 proteobacterium
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_3 10298 marine tidal mat clone BTM36
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_3 10353 sludge clone A9
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_3 9671 hydrothermal sediment clone AF420357
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_3 9735 uranium mining waste pile clone JG37-AG-15 proteobacterium
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_3 9755 bacterioplankton clone ZA3704c
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_3 9874 uranium mining waste pile clone JG34-KF-243 proteobacterium
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_3 9900 bioreactor clone mle1-27
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_3 10082 uranium mining waste pile clone JG37-AG-33 proteobacterium
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae sf_4 9733 bacterioplankton clone ZA3735c
Proteobacteria Betaproteobacteria Procabacteriales Procabacteriaceae sf_1 8136 Acanthamoeba sp. UWC6 symbiont
Proteobacteria Gammaproteobacteria Alteromonadales Pseudoalteromonadaceae sf_1 9627 Pseudoalteromonas sp
Proteobacteria Gammaproteobacteria Alteromonadales Pseudoalteromonadaceae sf_1 9339 Pseudoalteromonas sp. str. 05
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8813 Lyrodus pedicellatus symbiont
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9300 Lyrodus pedicellatus symbiont
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8487  
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8508 Pseudomonas citronellolis str. TERIDB26
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8691 Pseudomonas aeruginosa str. PAO1
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8754 Pseudomonas sp. str. P400Y-1
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9002 Paederus fuscipes endosymbiont
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9056 Pseudomonas aeruginosa str. #47
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9588 Pseudomonas citronellolis str. TERIDB18
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8288  
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8777 Pseudomonas sp. str. KNA6-5
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8852 Pseudomonas stutzeri str. KC
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9068 Pseudomonas stutzeri str. A1501
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9228 Pseudomonas stutzeri HY-105
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9295  
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8344 Anabaena circinalis AWQC118C isolate str. UNSW3
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8553 Pseudomonas fulva str. IAM 1587
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8725 Pseudomonas sp. str. 2N1-1
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8850 Agrobacterium agile str. IAM12615
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9238  
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9005 Pseudomonas sp. str. KY
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9613 Pseudomonas flavescens str. B62
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8474 ground water deep-well injection disposal site radioactive wastes Tomsk-7 clone S15A-MN7 proteobacterium
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8513 Pseudomonas monteilii str. CIP 104883
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9049 uranium mining mill tailing clone GR-Sh2-34 GR-Sh2-34
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9219 Pseudomonas cf. monteilii 9
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9343 Cellvibrio subsp. mixtus str. ACM 2601
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9469 cf. Pseudomonas sp. clone Llangefni 52
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9493 Pseudomonas sp. str. dcm7B
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8209 uranium mining waste pile clone JG37-AG-122 proteobacterium
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8433 Pseudomonas syringae pv. broussonetiae str. KOZ 8101 pv.
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8635  
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8853 Pseudomonas cichorii str. ATCC 10857T
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9028 Pseudomonas koreensis str. Ps 9-14
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9240 Pseudomonas fluorescens str. CHA0
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9267 Pseudomonas syringae pv. theae str. PT1
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9310 Pseudomonas sp. str. AC-167
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8338 Pseudomonas synxantha str. DSM 13080 G
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8561 Pseudomonas sp. B65
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8601 Pseudomonas marginalis str. ATCC 10844T
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8687 Pseudomonas putida str. ATCC 17472
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8708  
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9175 Pseudomonas extremorientalis str. KMM3447
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9221 Pseudomonas fulgida str. DSM 14938 = LMG 2146 P 515/12
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9243 Pseudomonas tolaasii str. LMG 2342T ()
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9366 Arctic seawater isolate str. R7366
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 8755 Pseudomonas sp. SK-1-3-1
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae sf_1 9172 Pseudomonas psychrophila str. E-3
Proteobacteria Betaproteobacteria Burkholderiales Ralstoniaceae sf_1 7823 Wautersia basilensis str. DSM 11853
Proteobacteria Betaproteobacteria Burkholderiales Ralstoniaceae sf_1 8110 Wautersia paucula str. LMG 3413
Proteobacteria Betaproteobacteria Burkholderiales Ralstoniaceae sf_1 8128 Cupriavidus necator
Proteobacteria Betaproteobacteria Burkholderiales Ralstoniaceae sf_1 7761 Ralstonia detusculanense str. APF11
Proteobacteria Betaproteobacteria Burkholderiales Ralstoniaceae sf_1 7778 Ralstonia insidiosa str. CCUG 46388
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 7051 Mycoplana dimorpha str. IAM 13154
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 6683 Sinorhizobium fredii str. ATCC35423
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 6725 Sinorhizobium meliloti str. 1021
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 6972 Ensifer adhaerens str. LMG 20582
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 6974 India: Himalayas Kaza Spiti Valley Cold Desert isolate str. Kaza-35 Kaza-35
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 6770 Rhizobium tropici str. LMG 9517
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 6871 Rhizobium mongolense str. USDA 1832
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 7135 Rhizobium gallicum str. FL27
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 7568 Rhizobium etli str. USDA 2667 ATCC 14483 SEMIA 043
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 6798 Agrobacterium tumefaciens TG14
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 6804 Rhizobium sp. str. SH19312
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 6964 Agrobacterium tumefaciens str. C58 Cereon
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 7334 Agrobacterium tumefaciens C4
Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae sf_1 7041 Rhizobium huautlense str. SO2 ()
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 6701 Roseobacter clone NAC11-3
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 6980 Loktanella vestfoldensis str. LMG 22003
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 7433 Scrippsiella trochoidea NEPCC 15
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 7453 Sulfitobacter sp. BIO-11
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 6888 hydrothermal vent strain str. TB66
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 7026 Leisingera methylohalidivorans str. MB2
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 7263  
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 7040 Paracoccus alcaliphilus str. JCM 7364
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 7508 lichen-dominated Antarctic cryptoendolithic community clone FBP492 proteobacterium
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 6991 Rhodobacter sphaeroides str. 2.4.1
Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae sf_1 7084 Scrippsiella trochoidea NEPCC 15
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 7800 sample taken upstream landfill clone BVC77 landfill
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 7817 TCE-contaminated site clone ccs265
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 7956  
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 8127 Zoogloea resiniphila str. PIV-3A2y
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 8131  
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 7907 Thauera aromatica str. LG356
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 7925 Thauera selenatis str. ATCC 55363T
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 8156 industrial-phenol-degrading community clone MM1 sp.
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 7824 termite gut homogenate clone Rs-B77 proteobacterium
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae sf_1 7762 Elbe River snow isolate Iso18 Iso18_1411
Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae sf_1 7556 Rickettsia bellii str. strains 369-C and G2D42
Proteobacteria Gammaproteobacteria Oceanospirillales Saccharospirillaceae sf_1 8889 hypersaline Mono Lake clone ML110J-5
Proteobacteria Alphaproteobacteria Consistiales SAR11 sf_2 7043 marine clone Arctic95D-8
Proteobacteria Gammaproteobacteria Alteromonadales Shewanellaceae sf_1 8581 Shewanella benthica str. DB21MT-2
Proteobacteria Gammaproteobacteria Alteromonadales Shewanellaceae sf_1 8641 Moritella abyssi str. 2693
Proteobacteria Gammaproteobacteria Alteromonadales Shewanellaceae sf_1 9081 Shewanella sp. str. MTW-1
Proteobacteria Gammaproteobacteria Alteromonadales Shewanellaceae sf_1 8662  
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 7440 Sphingobium chungbukense str. DJ77
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 7528 Sphingobium yanoikuyae str. GIFU9882
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 7548 Afipia genosp. 13 str. G8991
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 6650 Sphingomonas phyllosphaerae str. FA1
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 7016 Sphingomonas sp. str. SAFR-027
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 7535 Sphingomonas paucimobilis str. GIFU2395
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_15 7035 Sphingomonas asaccharolytica str. IFO 10564-T
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 7215 travertine hot spring clone SM2B06
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 6663 Sphingopyxis flavimaris str. SW-151
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 7100 Novosphingobium capsulatum str. GIFU11526
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae sf_1 7036 Lutibacterium anuloederans str. LC8
Proteobacteria Gammaproteobacteria Aeromonadales Succinivibrionaceae sf_1 8822 Anaerobiospirillum sp. str. 3J102
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophaceae sf_3 10067 benzoate-degrading consortium clone BA044
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae sf_1 9864 uranium mining waste pile clone JG37-AG-133 proteobacterium
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae sf_1 10013 hydrothermal sediment clone AF420341
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae sf_1 10021 uranium mill tailings soil sample clone Sh765B-TzT-29 proteobacterium
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae sf_1 9731 uranium mining waste pile clone JG37-AG-90 proteobacterium
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae sf_1 9845 uranium mining waste pile clone JG37-AG-128 proteobacterium
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae sf_1 10184 granular sludge clone R1p32
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae sf_1 10221 granular sludge clone R3p4
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae sf_1 10294 Desulfacinum hydrothermale str. MT-96
Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae sf_1 9661 DCP-dechlorinating consortium clone SHD-1
Proteobacteria Gammaproteobacteria Thiotrichales Thiotrichaceae sf_3 8321 Wadden Sea sediment clone Dangast A9
Proteobacteria Gammaproteobacteria Thiotrichales Thiotrichaceae sf_3 8741 marine sediment clone Limfjorden L10
Proteobacteria Gammaproteobacteria Thiotrichales Thiotrichaceae sf_3 8752 Beggiatoa sp. str. MS-81-1c
Proteobacteria Gammaproteobacteria Thiotrichales Thiotrichaceae sf_3 9015 Beggiatoa alba str. B18LD; ATCC 33555
Proteobacteria Gammaproteobacteria Thiotrichales Thiotrichaceae sf_3 9321 marine sediment clone Tokyo Bay D
Proteobacteria Gammaproteobacteria Thiotrichales Thiotrichaceae sf_3 8703 Beggiatoa sp. str. AA5A
Proteobacteria Deltaproteobacteria Desulfobacterales Unclassified sf_3 468 marine sediment clone Sva0515
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 7377 Rocky Mountain alpine soil clone W2b-8C
Proteobacteria Alphaproteobacteria Verorhodospirilla Unclassified sf_1 7109 diesel-polluted Bohai Gulf isolate str. M-5 M-5
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 7340 uranium mining waste pile soil sample clone JG30-KF-AS50
Proteobacteria Alphaproteobacteria Azospirillales Unclassified sf_1 7400 sphagnum peat bog clone K-5b5
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 6694 forested wetland clone RCP2-92
Proteobacteria Alphaproteobacteria Azospirillales Unclassified sf_1 6732 Anabaena circinalis AWQC118C isolate str. UNSW7
Proteobacteria Alphaproteobacteria Acetobacterales Unclassified sf_1 7028  
Proteobacteria Alphaproteobacteria Ellin314/wr0007 Unclassified sf_1 7123 uranium mining waste pile near Johanngeorgenstadt soil clone JG37-AG-102
Proteobacteria Alphaproteobacteria Ellin314/wr0007 Unclassified sf_1 7222 Great Artesian Basin clone B79
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 7575  
Proteobacteria Alphaproteobacteria Rhizobiales Unclassified sf_1 6726  
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 6920 Pseudovibrio denitrificans str. DN34
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 6954  
Proteobacteria Alphaproteobacteria Ellin329/Riz1046 Unclassified sf_1 6945 Rhizobiales str. A48
Proteobacteria Alphaproteobacteria Bradyrhizobiales Unclassified sf_1 7067 Blastochloris sulfoviridis str. GN1
Proteobacteria Alphaproteobacteria Bradyrhizobiales Unclassified sf_1 7264 Bosea thiooxidans TJ1
Proteobacteria Alphaproteobacteria Rhizobiales Unclassified sf_1 7339  
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 6898 heavy metal-contaminated soil clone a13113
Proteobacteria Alphaproteobacteria Bradyrhizobiales Unclassified sf_1 7199 uranium mill tailings clone Gitt-KF-194
Proteobacteria Alphaproteobacteria Rhizobiales Unclassified sf_1 6899  
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 6665 hydrocarbon-degrading consortium clone 4-Org2-22
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 7312  
Proteobacteria Alphaproteobacteria Rhizobiales Unclassified sf_1 6789 Shinella zoogloeoides str. ATCC 19623
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_2 6697 termite gut homogenate clone Rs-D84 proteobacterium
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_2 7188 termite gut homogenate clone Rs-B50 proteobacterium
Proteobacteria Alphaproteobacteria Consistiales Unclassified sf_4 7105 Mariana trough hydrothermal vent water 0.2micro-m filterable fraction clone MT-NB25
Proteobacteria Alphaproteobacteria Rhodobacterales Unclassified sf_5 7471 sponge clone TK03
Proteobacteria Alphaproteobacteria Consistiales Unclassified sf_5 6735 Candidatus Pelagibacter ubique str. HTCC1002
Proteobacteria Unclassified Unclassified Unclassified sf_20 6763  
Proteobacteria Alphaproteobacteria Rickettsiales Unclassified sf_2 6639  
Proteobacteria Alphaproteobacteria Rickettsiales Unclassified sf_1 7156 termite gut homogenate clone Rs-M62 proteobacterium
Proteobacteria Deltaproteobacteria AMD clone group Unclassified sf_1 6830 coal effluent wetland clone RCP124
Proteobacteria Alphaproteobacteria Sphingomonadales Unclassified sf_1 6653 Kaistobacter koreensis str. PB229
Proteobacteria Deltaproteobacteria Bdellovibrionales Unclassified sf_1 7382 marine clone Arctic95C-5
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 6987  
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 7572  
Proteobacteria Betaproteobacteria Burkholderiales Unclassified sf_1 8035  
Proteobacteria Betaproteobacteria MND1 clone group Unclassified sf_1 7808 Mammoth cave clone CCU25
Proteobacteria Betaproteobacteria Unclassified Unclassified sf_3 8007  
Proteobacteria Betaproteobacteria Unclassified Unclassified sf_3 8036 Uranium mill tailings soil sample clone Sh765B-TzT-132 proteobacterium
Proteobacteria Betaproteobacteria Unclassified Unclassified sf_3 7974  
Proteobacteria Betaproteobacteria Unclassified Unclassified sf_3 8114  
Proteobacteria Betaproteobacteria MND1 clone group Unclassified sf_1 8023 ferromanganous micronodule clone MND1
Proteobacteria Betaproteobacteria Unclassified Unclassified sf_3 8045  
Proteobacteria Betaproteobacteria MND1 clone group Unclassified sf_1 7818 soil sample uranium mining waste pile near town Johanngeorgenstadt clone JG36-TzT-215 proteobacterium
Proteobacteria Betaproteobacteria Neisseriales Unclassified sf_1 8037 Chitinimonas taiwanensis str. cf
Proteobacteria Betaproteobacteria Unclassified Unclassified sf_3 7997  
Proteobacteria Gammaproteobacteria uranium waste clones Unclassified sf_1 8747 uranium waste soil clone JG30-KF-CM35
Proteobacteria Gammaproteobacteria GAO cluster Unclassified sf_1 9059 activated sludge clone SBRH10
Proteobacteria Gammaproteobacteria aquatic clone group Unclassified sf_1 9246 Mammoth Cave sediment clone CCD24
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 9498  
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 9568 forested wetland clone RCP2-96
Proteobacteria Gammaproteobacteria Chromatiales Unclassified sf_1 9282  
Proteobacteria Gammaproteobacteria Legionellales Unclassified sf_1 9418 uranium mining waste pile clone JG37-AG-14 proteobacterium
Proteobacteria Deltaproteobacteria EB1021 group Unclassified sf_4 8169 forested wetland clone RCP2-54
Proteobacteria Gammaproteobacteria Symbionts Unclassified sf_1 8403 Selenate-reducing isolate str. KE4OH1
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8488  
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8646  
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8676  
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8926 inactive deep-sea hydrothermal vent chimneys clone IheB2-13
Proteobacteria Gammaproteobacteria aquatic clone group Unclassified sf_1 8957 marine clone Arctic97C-5
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 9105  
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 9124 10e-6 dilution marine samples Weser estuary clone DC8-80-1 proteobacterium
Proteobacteria Gammaproteobacteria Symbionts Unclassified sf_1 9128 Lucina nassula gill symbiont
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 9394  
Proteobacteria Gammaproteobacteria Symbionts Unclassified sf_1 9556 Seepiophila jonesi symbiont
Proteobacteria Gammaproteobacteria SUP05 Unclassified sf_1 8605 bacterioplankton clone ZA2525c
Proteobacteria Gammaproteobacteria SUP05 Unclassified sf_1 8654 inactive deep-sea hydrothermal vent chimneys clone IheB2-31
Proteobacteria Gammaproteobacteria SUP05 Unclassified sf_1 8965 Bathymodiolus thermophilus gill symbiont
Proteobacteria Gammaproteobacteria uranium waste clones Unclassified sf_1 8231 uranium waste soil clone JG30a-KF-21
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8339 water 5 m downstream manure clone 35ds5
Proteobacteria Gammaproteobacteria Ellin307/WD2124 Unclassified sf_1 8532  
Proteobacteria Gammaproteobacteria Ellin307/WD2124 Unclassified sf_1 9458 uranium mining waste pile clone JG37-AG-94 proteobacterium
Proteobacteria Gammaproteobacteria SAR86 Unclassified sf_1 8962 bacterioplankton clone AEGEAN_234
Proteobacteria Gammaproteobacteria Legionellales Unclassified sf_3 8587 Mars Odyssey Orbiter and encapsulation facility clone T5-3
Proteobacteria Gammaproteobacteria GAO cluster Unclassified sf_1 9468 activated sludge clone SBRL2_40
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_4 8855  
Proteobacteria Unclassified Unclassified Unclassified sf_8 9558  
Proteobacteria Gammaproteobacteria Oceanospirillales Unclassified sf_3 8230  
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8245  
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8883  
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 9044 hydrothermal sediment clone AF420370
Proteobacteria Gammaproteobacteria Thiotrichales Unclassified sf_1 8323 hydrothermal sediment clone AF420363
Proteobacteria Alphaproteobacteria Unclassified Unclassified sf_6 8780 uranium mining mill tailing clone GR-296.II.89 GR-296.II.89
Proteobacteria Gammaproteobacteria Oceanospirillales Unclassified sf_3 8327 Arctic sea ice ARK10148
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8606  
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8714 Marinobacter hydrocarbonoclasticus str. ATCC 27132T
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 8959 bacterioplankton clone AEGEAN_133
Proteobacteria Gammaproteobacteria Alteromonadales Unclassified sf_1 8483 Rheinheimera baltica str. OS140 Baltic # 166
Proteobacteria Gammaproteobacteria Shewanella Unclassified sf_1 9344 Shewanella algae str. ATCC 51192
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 9367 USA: Pacific Ocean seawater Naha Vents Hawaii isolate str. PV-4
Proteobacteria Gammaproteobacteria Unclassified Unclassified sf_3 9473 Arctic pack ice; northern Fram Strait; 80 31.1 N; 01 deg 59.7 min E clone ARKDMS-58
Proteobacteria Gammaproteobacteria Enterobacteriales Unclassified sf_1 8430 Salmonella bongori str. JEO 4162
Proteobacteria Deltaproteobacteria Desulfovibrionales Unclassified sf_1 9828 termite gut homogenate clone Rs-M89 proteobacterium
Proteobacteria Deltaproteobacteria Myxococcales Unclassified sf_1 10092 heavy metal-contaminated soil clone a13134
Proteobacteria Deltaproteobacteria Myxococcales Unclassified sf_1 10259  
Proteobacteria Deltaproteobacteria Unclassified Unclassified sf_7 10048  
Proteobacteria Deltaproteobacteria Unclassified Unclassified sf_9 10049 DCP-dechlorinating consortium clone SHA-72
Proteobacteria Deltaproteobacteria Unclassified Unclassified sf_9 9760 deep marine sediment clone MB-A2-137
Proteobacteria Deltaproteobacteria Unclassified Unclassified sf_9 9784 Antarctic sediment clone LH5_30
Proteobacteria Deltaproteobacteria Unclassified Unclassified sf_9 9798 uranium mill tailings soil sample clone GuBH2-AD/TzT-67 proteobacterium
Proteobacteria Deltaproteobacteria Unclassified Unclassified sf_9 9876 deep marine sediment clone MB-B2-106
Proteobacteria Deltaproteobacteria EB1021 group Unclassified sf_4 9884 forested wetland clone RCP2-62
Proteobacteria Deltaproteobacteria AMD clone group Unclassified sf_1 10084 acid mine drainage clone AS6
Proteobacteria Deltaproteobacteria Desulfuromonadales Unclassified sf_1 10076 Great Artesian Basin clone G13
Proteobacteria Deltaproteobacteria dechlorinating clone group Unclassified sf_1 9959 forested wetland clone FW110
Proteobacteria Deltaproteobacteria EB1021 group Unclassified sf_4 10024 hydrothermal sediment clone AF420338
Proteobacteria Deltaproteobacteria AMD clone group Unclassified sf_1 9678 coal effluent wetland clone RCP185
Proteobacteria Deltaproteobacteria Desulfobacterales Unclassified sf_4 9951 forested wetland clone FW13
Proteobacteria Deltaproteobacteria Unclassified Unclassified sf_9 9738 marine methane seep clone 1513
Proteobacteria Deltaproteobacteria AMD clone group Unclassified sf_1 9945 acid mine drainage clone BA18
Proteobacteria Deltaproteobacteria Desulfobacterales Unclassified sf_3 9813 hydrothermal sediment clone AF420340
Proteobacteria Deltaproteobacteria Unclassified Unclassified sf_9 9890 termite gut homogenate clone Rs-K70 proteobacterium
Proteobacteria Epsilonproteobacteria Campylobacterales Unclassified sf_1 10543 hydrothermal vent clone PVB_10
Proteobacteria Epsilonproteobacteria Campylobacterales Unclassified sf_1 10427 hydrothermal vent 9 degrees North East Rise Pacific Ocean clone CH3_17_BAC_16SrRNA_9N_EPR
Proteobacteria Epsilonproteobacteria Campylobacterales Unclassified sf_1 10475 hydrothermal sediment clone AF420359
Proteobacteria Epsilonproteobacteria Campylobacterales Unclassified sf_1 10480 Paralvinella palmiformis mucus secretions clone P. palm C 84 proteobacterium
Proteobacteria Epsilonproteobacteria Campylobacterales Unclassified sf_1 10489 S17sBac16 complete clone
Proteobacteria Epsilonproteobacteria Campylobacterales Unclassified sf_1 10497 UASB reactor granular sludge clone PD-UASB-2 proteobacterium
Proteobacteria Epsilonproteobacteria Campylobacterales Unclassified sf_1 10530 hydrothermal vent 9 degrees North East Rise Pacific Ocean clone CH5_6_BAC_16SrRNA_9N_EPR
Proteobacteria Unclassified Unclassified Unclassified sf_20 2520  
Proteobacteria Deltaproteobacteria Unclassified Unclassified sf_9 244 deep marine sediment clone MB-C2-152
Proteobacteria Deltaproteobacteria AMD clone group Unclassified sf_1 3084 coal effluent wetland clone RCP216
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae sf_1 8999 Photobacterium leiognathi str. LN101
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae sf_1 8665 Vibrio gallicus str. CIP 107867; HT 3-3
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae sf_1 8267 Vibrio pomeroyi str. LMG 20537
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae sf_1 8798 Vibrio aestuarianus str. KT0901
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae sf_1 8888 Vibrio aestuarianus str. 01/151
Proteobacteria Alphaproteobacteria Bradyrhizobiales Xanthobacteraceae sf_1 6660 Azorhizobium caulinodans str. ORS 571
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 9167 pea aphid symbiont clone APe4_38
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 8689 Dyemonas todaii str. XD10
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 9332 wetland ecosystem constructed to remediate mine drainage isolate str. WJ2 WJ2
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 8392 penguin droppings sediments clone KD2-14
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 8983 Iron oxidizing strain ES-1
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 9031 municipal wastewater treatment bioreactor clone LB-P bacterium
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 9320 Waste-gas biofilter clone BIyi3
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 8577 Xanthomonas axonopodis pv. citri str. MA
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 9569  
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 8538  
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 8563 Pseudoxanthomonas mexicana str. AMX 26B
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 9270 Stenotrophomonas rhizophila str. e-p10
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae sf_3 9286 Stenotrophomonas maltophilia str. LMG 11104
SPAM Unclassified Unclassified Unclassified sf_1 705 uranium tailings soil clone Sh765B-AG-45
SPAM Unclassified Unclassified Unclassified sf_1 738 uranium mining waste clone JG34-KF-252
Spirochaetes Spirochaetes Spirochaetales Leptospiraceae sf_3 6496 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6459 Spirochaeta sp. str. BHI80-158
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_3 6558 Spironema culicis str. BR91
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6526 Treponema sp. str. 7CPL208
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6479 Treponema sp
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6580 Treponema sp. str. III:C:BA213
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6458 termite gut clone NkS34
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6494 termite gut homogenate clone Rs-C47 sp.
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6562 forested wetland clone RCP1-96
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6507 termite gut clone NkS-Ste2
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6476 termite gut clone NkS50
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6488 Treponema primitia str. ZAS-1
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6490 termite gut homogenate clone BCf4-14
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6491 termite gut homogenate clone BCf8-03
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6506 termite gut homogenate clone Rs-J58 sp.
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6508 termite hindgut clone mpsp2
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6523 termite gut homogenate clone Rs-J64 sp.
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6565 termite gut clone NkS-Oxy25
Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae sf_1 6571 Mixotricha paradoxa is flagellate hindgut Mastotermes darwiniensis clone mp4 of
Synergistes Unclassified Unclassified Unclassified sf_3 117 termite gut homogenate clone Rs-D89
Synergistes Unclassified Unclassified Unclassified sf_3 353 UASB reactor granular sludge clone PD-UASB-13 G+C
Synergistes Unclassified Unclassified Unclassified sf_3 60 Flexistipes sp. str. E3_33
Synergistes Unclassified Unclassified Unclassified sf_3 601 terephthalate-degrading consortium clone TA19
Synergistes Unclassified Unclassified Unclassified sf_3 719 Synergistes sp. P1 str. P4G_18
Synergistes Unclassified Unclassified Unclassified sf_3 740 swine intestine clone p-4292-4Wa3
Synergistes Unclassified Unclassified Unclassified sf_3 808 oral cavity clone BH017
Termite group 1 Unclassified Unclassified Unclassified sf_2 437 termite gut homogenate clone Rs-D43 group
Thermodesulfobacteria Thermodesulfobacteria Thermodesulfobacteriales Thermodesulfobacteriaceae sf_1 667 Geothermobacterium ferrireducens
Thermotogae Thermotogae Thermotogales Thermotogaceae sf_4 51 Thermosipho sp. str. MV1063
TM6 Unclassified Unclassified Unclassified sf_1 9803 forest soil clone S1204
TM7 Unclassified Unclassified Unclassified sf_1 5177  
TM7 TM7-3 Unclassified Unclassified sf_1 8155 oral periodontitis clone EW086
TM7 TM7-3 Unclassified Unclassified sf_1 2697 midgut homogenate Pachnoda ephippiata larva clone PeM47
TM7 Unclassified Unclassified Unclassified sf_1 3025  
Unclassified Unclassified Unclassified Unclassified sf_93 925 4MB-degrading consortium clone UASB_TL26
Unclassified Unclassified Unclassified Unclassified sf_106 243 hot spring clone OPB25
Unclassified Unclassified Unclassified Unclassified sf_160 485 thermal spring mat clone O1aA90
Unclassified Unclassified Unclassified Unclassified sf_160 226  
Unclassified Unclassified Unclassified Unclassified sf_160 333  
Unclassified Unclassified Unclassified Unclassified sf_160 651  
Unclassified Unclassified Unclassified Unclassified sf_160 6430  
Unclassified Unclassified Unclassified Unclassified sf_160 6456  
Unclassified Unclassified Unclassified Unclassified sf_160 6360  
Unclassified Unclassified Unclassified Unclassified sf_140 6355  
Unclassified Unclassified Unclassified Unclassified sf_160 7444  
Unclassified Unclassified Unclassified Unclassified sf_160 7767  
Unclassified Unclassified Unclassified Unclassified sf_160 10012  
Unclassified Unclassified Unclassified Unclassified sf_95 2545 anaerobic sludge isolate str. JE
Unclassified Unclassified Unclassified Unclassified sf_160 2488  
Unclassified Unclassified Unclassified Unclassified sf_156 4291 Mono Lake at depth 35m station 6 July 2000 clone ML635J-21 G+C
Unclassified Unclassified Unclassified Unclassified sf_160 4410  
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Unclassified sf_4 169 anoxic marine sediment clone LD1-PA26
Verrucomicrobia Unclassified Unclassified Unclassified sf_3 40 Elbe river clone DEV055
Verrucomicrobia Unclassified Unclassified Unclassified sf_3 486 Elbe river clone DEV045
Verrucomicrobia Unclassified Unclassified Unclassified sf_5 686 hydrothermal vent sediment clone a2b018
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Unclassified sf_3 11 sludge clone H2
Verrucomicrobia Unclassified Unclassified Unclassified sf_4 288 Prosthecobacter dejongeii
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Unclassified sf_3 792 termite gut homogenate clone Rs-P07 bacterium
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobia SD 5 sf_1 530 anoxic marine sediment clone LD1-PB20
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobia SD 5 sf_1 533 anoxic marine sediment clone LD1-PB12
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobia SD 5 sf_1 547 anoxic marine sediment clone LD1-PB1
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobia SD 5 sf_1 629 anoxic marine sediment clone LD1-PA50
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobia SD 7 sf_1 446 anoxic marine sediment clone LD1-PA34
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobia SD 7 sf_1 559 anoxic marine sediment clone LD1-PA20
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobia SD 7 sf_1 760 Mono lake clone ML316M-1
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobiaceae sf_7 29 Fucophilus fucoidanolyticus str. SI-1234
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobiaceae sf_6 871  
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Xiphinematobacteraceae sf_3 888 Candidatus Xiphinematobacter brevicolli
WS3 Unclassified Unclassified Unclassified sf_3 95 marine sediment above hydrate ridge clone Hyd24-32
WS3 Unclassified Unclassified Unclassified sf_1 2537 anoxic marine sediment clone LD1-PA39
WS5 Unclassified Unclassified Unclassified sf_2 8119 hydrothermal vent sediment clone a2b013
a

S-F, Subfamily identification; bTaxon ID, PhyloChip Taxon identification number; cRepresentative species, Taxon bacterial species identifier.