Table 1.
Primer | Sequence | Length | Accession Number |
---|---|---|---|
βactinF | 5′CCCAGGCATTGCTGACAGG3′ | 141 | X03672 |
βactinR | 5′TGGAAGGTGGACAGTGAGGC3′ | ||
PPAR γF | 5′CAGGCTTGCTGAACGTGAAG3′ | 117 | NM_011146 |
PPAR γR | 5′GGAGCACCTTGGCGAACA3′ | ||
E-selectinF | 5′CAGCTTTGCATGATGGCGTCT3′ | 83 | NM_011345 |
E-selectinR | 5′GAAGGGTACAGGCGAGTTGG3′ | ||
VCAM-1F | 5′TCTCCCAGGAATACAACGAT3′ | 75 | NM_011693 |
VCAM-1R | 5′ACAGGTCATTGTCACAGCAC3′ | ||
MAdCAM-1F | 5′CCCATGGCCACAGCTACCTCA3′ | 85 | NM_013591 |
MAdCAM-1R | 5′CCCTGGCCCTAGTACCCTAC3′ | ||
MMP-9F | 5′GGTGGCAGCGCACGAGTT3′ | 128 | NM_013599 |
MMP-9R | 5′GGATGCCGTCTATGTCGTCTT3′ | ||
IL-6F | 5′TTTCCTCTGGTCTTCTGGAG3′ | 92 | NM_031168 |
IL6-R | 5′CTGAAGGACTCTGGCTTTGT3′ | ||
IFNγ F | 5′GGGGGTGGGGGACAGC3′ | 140 | K00083 |
IFNγ R | TGGCCCGGAGTGTAGACATC3′ |
F, forward; R, reverse. PCR primer pairs were designed for an optimal annealing temperature of 57°C and product lengths between 78 and 157 base pairs.
When plotting threshold cycle versus log starting quantity (pg), standard curves had slopes between −3.1 and −3.7; PCR efficiencies between 92 and 105 and R2 above 0.98.