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. Author manuscript; available in PMC: 2012 Sep 1.
Published in final edited form as: J Nutr Biochem. 2010 Dec 15;22(9):812–819. doi: 10.1016/j.jnutbio.2010.06.011

Table 1.

Oligonucleotide sequences for quantitative real-time PCR.*,

Primer Sequence Length Accession Number
βactinF 5′CCCAGGCATTGCTGACAGG3′ 141 X03672
βactinR 5′TGGAAGGTGGACAGTGAGGC3′
PPAR γF 5′CAGGCTTGCTGAACGTGAAG3′ 117 NM_011146
PPAR γR 5′GGAGCACCTTGGCGAACA3′
E-selectinF 5′CAGCTTTGCATGATGGCGTCT3′ 83 NM_011345
E-selectinR 5′GAAGGGTACAGGCGAGTTGG3′
VCAM-1F 5′TCTCCCAGGAATACAACGAT3′ 75 NM_011693
VCAM-1R 5′ACAGGTCATTGTCACAGCAC3′
MAdCAM-1F 5′CCCATGGCCACAGCTACCTCA3′ 85 NM_013591
MAdCAM-1R 5′CCCTGGCCCTAGTACCCTAC3′
MMP-9F 5′GGTGGCAGCGCACGAGTT3′ 128 NM_013599
MMP-9R 5′GGATGCCGTCTATGTCGTCTT3′
IL-6F 5′TTTCCTCTGGTCTTCTGGAG3′ 92 NM_031168
IL6-R 5′CTGAAGGACTCTGGCTTTGT3′
IFNγ F 5′GGGGGTGGGGGACAGC3′ 140 K00083
IFNγ R TGGCCCGGAGTGTAGACATC3′
*

F, forward; R, reverse. PCR primer pairs were designed for an optimal annealing temperature of 57°C and product lengths between 78 and 157 base pairs.

When plotting threshold cycle versus log starting quantity (pg), standard curves had slopes between −3.1 and −3.7; PCR efficiencies between 92 and 105 and R2 above 0.98.