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. 2011 May;18(5):463–468. doi: 10.1177/1933719110388293

Table 1.

Allele Frequencies for Known SNPs in Patients With MM, Categorized by Race and Lesion Level a

SNP Major Allele Common Allele Frequency Expected Frequency (dbSNP) b P Value b
Location All MM Patients; N = 96 Cauc Amer (≥L1); N = 24 Mex Amer (≥L1); N = 24 Cauc Amer (<L1); N = 24 Mex Amer (<L1); N = 24
rs11537639 Exon 1 A 1.0 1.0 1.0 1.0 1.0 NA
rs11537640 Exon 1 A 0.841 0.875 0.738 0.833 0.870 0.810 NS
rs28365848 Exon 1 A 0.833 0.875 0.738 0.833 0.875 0.780 NS
rs1385129 Exon 2 G 0.745 0.833 0.625 0.792 0.729 0.750 NS
rs11537641 Exon 4 C 0.849 0.854 0.833 0.854 0.854 0.770 NS
rs2229682 Exon 5 G 0.839 0.896 0.813 0.792 0.854 0.825 NS
rs2229681 Exon 8 C 1.0 1.0 1.0 1.0 1.0 1.0 NS
rs2306662 Exon 8 A 1.0 1.0 1.0 1.0 1.0 1.0 NS
rs2236574 Exon 9 C 1.0 1.0 1.0 1.0 1.0 1.0 NS
rs13306758 Exon 10 C 1.0 1.0 1.0 1.0 1.0 1.0 NS

Abbreviations: NA, not available; NS, not significant; MM, myelomeningocele; SNPs, single nucleotide polymorphisms; Cauc Amer, Caucasian American; Mex Amer, Mexican American.

a Expected frequency from dbSNP in CEU samples.

b P value indicates 2-sided Fisher exact test comparing patients with MM to the expected frequency.