Table 1.
Summary of Biochemical Properties of the RAS Proteins Grouped into Five Classes
Classes | RAS mutant |
mant-GppNHp association |
Intrinsic mantGDP dissociation |
GEF-catalyzed mantGDP dissociation |
Intrinsic GTPase |
GAP-stimulated GTPase |
RAF-RBD binding |
---|---|---|---|---|---|---|---|
Controls | wt | 1.3a | 0.00003a | 0.09a | 0.0093a | 9.3a | 0.22b |
G12V | ≈ | ≈ | ≈ | ↓ | ![]() |
![]() |
|
F28L | ![]() |
↑ | ↑ | ≈ | ↓ | ![]() |
|
A | K5N | ⇩ | ≈ | ≈ | ≈ | ≈ | ≈ |
T58I | ≈ | ↑ | ≈ | ≈ | ≈ | ![]() |
|
E153V | ↓ | ≈ | ≈ | ≈ | ≈ | ![]() |
|
B | V14I | ↓ | ⇧ | ⇧ | ≈ | ≈ | ![]() |
C | Q22R | ↓ | ≈ | ≈ | ≈ | ⇩ | ≈ |
D | Q22E | ↓ | ⇧ | ⇧ | ≈ | ⇩ | ![]() |
F156L | ↓ | ![]() |
⇧ | ≈ | ⇩ | ![]() |
|
E | P34L | ≈ | ≈ | ≈ | ≈ | ![]() |
![]() |
P34R | ≈ | ≈ | ≈ | ≈ | ![]() |
![]() |
|
G60R | ↓ | ≈ | ![]() |
↓ | ![]() |
![]() |
Based on our biochemical data, RAS mutants are grouped into different functional classes: (A) no major changes; (B) increase in intrinsic and catalyzed nucleotide exchange; (C) decrease in GAP-stimulated GTPase; (D) increase in intrinsic and catalyzed nucleotide exchange and decreased in GAP-stimulated GTPase; (E) defective interaction with GAPs and effectors and also with GEFs in the case of RASG60R. RASwt, RASG12V, and RASF28L were included as controls. Black arrows outlines effects that favor increased signaling, gray arrows those impaired signaling, such as lower affinity of effectors. ≈≥ 2-fold, ↓or ↑ = 3–15-fold, ⇩or ⇧ = 15–40-fold, or
> 40-fold relative to RASwt values. Relative values are shown in Table S4.
Observed rate constants (kobs) in sec−1.
Dissociations constants (Kd) in µM.