Table 2.
HSIC runtime | FastEpistasis runtime |
---|---|
GPU [min] | 48 CPUs [min] |
2 408.92 | 3 440.30 |
(~40 h) | (~57 h) |
Checking 536 750 SNPs (1.44×1011 pairs) in 491 subjects. 1 137 450 interactions below a threshold of P<10−5 are found.
HSIC runtime | FastEpistasis runtime |
---|---|
GPU [min] | 48 CPUs [min] |
2 408.92 | 3 440.30 |
(~40 h) | (~57 h) |
Checking 536 750 SNPs (1.44×1011 pairs) in 491 subjects. 1 137 450 interactions below a threshold of P<10−5 are found.