Table 1. Breakdown of the Gram-negative bacterial protein benchmark dataset taken from [11].
Subset | Subcellular location | Number of proteins |
Cell inner membrane | 557 | |
Cell outer membrane | 124 | |
Cytoplasm | 410 | |
Extracellular | 133 | |
Fimbrium | 32 | |
Flagellum | 12 | |
Nucleoid | 8 | |
Periplasm | 180 | |
Total number of locative proteins | 1,456a | |
Total number of different proteins | 1,392b |
None of proteins included here has sequence identity to any other in a same subcellular location.
See Eqs.36–38 of [2] for the definition about the number of locative proteins, and its relation with the number of different proteins.
Of the 1,392 different proteins, 1,328 have one subcellular location, 64 have two locations, and none have three or more locations.