Table 1. Integration sites for Bxv-1-like virus infecting LAPC4 and VCaP prostate cancer cell lines.
Line | Chromosome | Start* | Location |
LAPC4 | 3** | 3527870 | Intron 2–3 of AC026188.1 Novel processed transcript |
9 | 25617692 | ||
VCaP | 1**† | 245135029 | Intron 1–2 of EF-hand calcium binding domain 2 (EFCAB2) |
1 | 234030449 | ||
4 | 71834780 | Intron 2–3 of Mps one binder kinase activator-like 1A (MOBKL1A) | |
7† | 2550730 | Intron 2–3 of AC092488.1 Known protein coding | |
11 | 85540286 | ||
12 | 124181500 | Intron 12–13 of Tectonic family member 2 (TCTN2) | |
20 | 12058633 |
*Based on Ensembl BLAT release 60- Nov 2010.
**Confirmed by PCR amplification and sequencing across integration sites.
†Located within 5 kb upstream or downstream of a known transcription start site.