Table 1.
Mature miRNA sequence | MiRNA precursor location | Name | Reads | ||
---|---|---|---|---|---|
IVF1.2 | IVF3.2 | IVF3.3 | |||
TATGGAGGTCTCTGTCTGGCT | chr1:205,580,537-205,580,616:- | miR-1843-5p | 124 | 159 | 152 |
TCTGATCGTTCCCCTCCATACA | chr1:205,580,537-205,580,616:- | miR-1843-3p | 127 | 174 | 193 |
TGATGGGTGAATTTGTAGAAGG | chr1:70,976,129-70,976,208:- | miR-1262-3p | 2,557 | 2,267 | 2,150 |
GTTGGGACAAGAGAACGGTCTT | chr1:158,332,926-158,333,000:- | miR-3122-5p | 252 | 371 | 214 |
AATTCCCTTATGGATAATCTGG | chr2:80519804-80519882:+ | miR-3938-3p | 138 | 227 | 104 |
CATGCTAGAACAGAAAGAATGGG | chr3:106,443,245-106,443,327:+ | miR-3146-3p | 37 | 120 | 61 |
TATTTTGAGTGTTTGGAATTGA | chr4:125,407,861-125,407,939:+ | miR-3145-3p | 35 | 36 | 31 |
GAAAATGATGAGTAGTGACTGATG | chr4:128869861-128869951:+ | miR-3622-3p | 72 | 243 | 73 |
AAGAGCTTTTGGGAATTCAGGTAG | chr5:144,708,317-144,708,405:- | miR-3140-3p | 151 | 358 | 200 |
ATATACAGGGGGAGACTCTTAT | chr7:164,327,476-164,327,555:+ chr7:164,328,696-164,328,775:+ |
miR-1185-3p | 52 | 176 | 105 |
CGGGAACGTCGAGACTGGAGC | chr7:164,844,819-164,844,896:- | miR-1247-3p | 127 | 131 | 32 |
TTAGGGCCCTGGCTCCATCTCC | chr9:73,887,081-73,887,164:+ | miR-1296-5p | 33 | 123 | 53 |
TCGACCGGACCTCGACCGGCTCG | chr9:103,084,702-103,084,783:- | miR-1307-5p | 291 | 872 | 944 |
ACTCGGCGTGGCGTCGGTCGTGG | chr9:103,084,702-103,084,783:- | miR-1307-3p | 1,936 | 3,975 | 3,030 |
GACTCTAGCTGCCAAAGGCGCT | chr11:98,713,141-98,713,223:+ | miR-1251-5p | 40 | 97 | 59 |
TGTGGGACCTCTGGCCTTGGC | chr11:105706113-105706195:+ | miR-3922-3p | 192 | 250 | 248 |
TGCGGGGCTAGGGCTAACAGCA | chr16:11,829,804-11,829,901:+ | miR-744-5p | 11,447 | 24,797 | 14,171 |
CTGTTGCCACTAACCTCAACC | chr16:11,829,804-11,829,901:+ | miR-744-3p | 75 | 81 | 104 |
TTTCCGGCTCGCGTGGGTGTGT | chr16:18,891,345-18,891,423:- | miR-1180-3p | 30 | 133 | 77 |
CCGTCCTAAGGTTGTTGAGTT | chrX:68,990,098-68,990,174:+ | miR-676-3p | 46 | 206 | 206 |
TTCATTCGGCTGTCCAGATGTA | chrX:113,236,410-113,236,505:+ | miR-1298-5p | 246 | 893 | 852 |
CATCTGGGCAACTGACTGAACT | chrX:113,236,410-113,236,505:+ | miR-1298-3p | 30 | 98 | 58 |
TGAGTACCGCCATGTCTGTTGGG | chrX:113,271,154-113,271,232:+ | miR-1911-5p | 88 | 843 | 473 |