Table 2. PCR primer sets used in this study.
Gene | Primer set | Nucleotide sequence (5′→3′) | Expected size (bp) | Reference |
Rickettsia 16S rRNA | Rb-F1513-R | GCTCAGAACGAACGCTATCACGGYTACCTTGTTACGACTT | ∼1500 | [25] |
Rickettsia gltA | 409-F1273-R | CCTATGGCTATTATGCTTGC CATAACCAGTGTAAAGCTG | ∼850 | [40] |
Rickettsia RickA | Trp4-FBcr-RRicka5-FaRicka3-Ra | GGATTATCTCTCTCATATTTG TCTGCTGCTGCGTTTTATTAT ATGGCAAAGATAACTGAGCT CTACCTTTGTTGAGATTGTT | ∼1500 | This paper. Designed based on Rickettsia bellii genome (NCBI accession NC_007940) |
Rickettsia GroEL | RGEL-508-FRGEL-stop-R | GGCAAAGAAGGCGTAATAACTG TTAGAAGTCCATACCTCCCA | ∼1100 | [41] |
Portiera 16S rRNA (real-time quantitative PCR) | Port73-FPort266-R | GTGGGGAATAACGTACGG CTCAGTCCCAGTGTGGCTG | ∼195 | This paper. Designed based on Portiera aleyrodidarum genome |
Actin B. tabaci (real-time quantitative PCR) | Wf-B actin-FWf-B actin-R | TCTTCCAGCCATCCTTCTTG CGGTGATTTCCTTCTGCATT | ∼200 | [42] |
Hamiltonella dnaK (real-time quantitative PCR) | dnaK-FdnaK-R | GGTTCAGAAAAAAGTGGCAG CGAGCGAAAGAGGAGTGAC | ∼200 | [43] |
Rickettsia gltA (real-time quantitative PCR) | glt375-Fglt574-R | TGGTATTGCATCGCTTTGGG TTTCTTTAAGCACTGCAGCACG | ∼200 | This paper. Designed based on Rickettsia bellii genome (NCBI accession NC_007940) |
Internal primers.