Table 5.
No. | Gene symbol | RefSeq accession | miR-17-92 seed family | Seed pos. in mouse 3’ UTR | Seed pairing Type | pCT score | Alignment | Percentage identity |
---|---|---|---|---|---|---|---|---|
1 | APP | NM_007471.2 | miR-17 family | 726–732 | 7mer-m8 | 0.60 | 91.0 | |
2 | BCL2L11 (Bim) | NM_207680.2 | miR-17 family | 2107–2113 | 8mer | 0.93 | n/a | |
3 | CCND1 | NM_007631.2 | miR-17 family | 925–931 | 7mer-m8 | 0.87 | 100.0 | |
4 | CDKN1A (p21) | NM_007669.3 | miR-17 family | 436–442 | 7mer-m8 | 0.85 | n/a | |
5 | CTGF | NM_010217.1 | miR-18 family | 1023–1029 | 7mer-m8 | 0.39 | 100.0 | |
6 | E2F1 | NM_007891.2 | miR-17 family | 469–475 | 7mer-m8 | 0.59 | 91.7 | |
E2F1 | NM_007891.2 | miR-17 family | 984–990 | 7mer-m8 | 0.77 | n/a | ||
7 | GAB1 | NM_021356.2 | miR-17 family | 263–269 | 7mer-m8 | 0.68 | n/a | |
8 | HIF-1α | NM_010431.1 | miR-17 family | 975–981 | 7mer-m8 | 0.36 | 95.0 | |
HIF-1α | NM_010431.1 | miR-18 family | 304–310 | 7mer-m8 | 0.51 | 100.0 | ||
9 | HIPK3 | NM_005734.3 | miR-25 family | 118–124 | 7mer-m8 | 0.73 | 100.0 | |
HIPK3 | NM_005734.3 | miR-19 family | 165–171 | 8mer | 0.79 | n/a | ||
10 | IRF1 | NM_008390.1 | miR-17 family | 584–590 | 7mer-m8 | 0.44 | 100.0 | |
11 | ITCH | NM_008395.2 | miR-17 family | 1102–1108 | 7mer-m8 | 0.74 | n/a | |
12 | MAPK9 | NM_016961.2 | miR-17 family | 361–367 | 7mer-m8 | < 0.1 | 95.0 | |
13 | MAPK14 | NM_011951.2 | miR-19 family | 1819–1825 | 8mer | 0.39 | n/a | |
14 | MYLIP | NM_153789.3 | miR-25 family | 1200–1206 | 8mer | 0.96 | 95.0 | |
MYLIP | NM_153789.3 | miR-19 family | 1314–1320 | 8mer | 0.90 | 100.0 | ||
15 | NCOA3 | NM_008679.2 | miR-17 family | 588–594 | 8mer | 0.95 | 95.0 | |
16 | PKD1. PKD2 | NM_013630.2 | miR-17 family | 192–198 | 8mer | 0.90 | 82.6 | |
17 | PTEN | NM_008960.2 | miR-19 family | 1236–1242 | 8mer | 0.58 | 100.0 | |
18 | RB1 | NM_009029.1 | miR-17 family | 844–850 | 7mer-m8 | 0.31 | 95.0 | |
19 | RB2/p130 | NM_011250.2 | miR-17 family | 598–604 | 8mer | 0.83 | 100.0 | |
20 | RUNX1 | NM_009821.1 | miR-17 family | 1748–1756 | 7mer-m8 | 0.88 | n/a | |
21 | SOCS-1 | NM_009896.2 | miR-19 family | 293–299 | 8mer | 0.9 | 100.0 | |
22 | STAT3 | NM_213659.2 | miR-17 family | 156–162 | 7mer-m8 | 0.56 | 96.0 | |
23 | TGFBR2 | NM_009371.2 | miR-17 family | 298–304 | 8mer | 0.96 | 95.0 | |
24 | THBS1 | NM_011580.3 | miR-19 family | 1840–1846 | 7mer-1A | 0.36 | n/a | |
25 | TSG101 | NM_021884.3 | miR-17 family | 170–176 | 7mer-m8 | < 0.1 | 100.0 | |
26 | VEGFA | NM_001025250.2 | miR-17 family | 109–115 | 7mer-m8 | 0.87 | 100.0 |