Table 6.
Top ranking co-occurring domains in high confidence binding sites from yeast.
| Domain Name A | Domain Name B | DOMINE |
|---|---|---|
| Src homology-3 domain | Src homology-3 domain | Known |
| Src homology-3 domain | Uncharacterised conserved protein UCP037464, actin patch protein 1 | Novel |
| Src homology-3 domain | Adenylate cyclase-associated CAP, N-terminal | Known |
| Src homology-3 domain | EF-Hand 1, calcium-binding site | Novel |
| Src homology-3 domain | Protein of unknown function DUF3210 | Known |
| Src homology-3 domain | BTB/POZ fold | Novel |
| Src homology-3 domain | Septin | Known |
| Src homology-3 domain | C2 calcium/lipid-binding domain, CaLB | Novel |
| Src homology-3 domain | Serine/threonine-protein kinase-like domain | Known |
| Homeobox | Transcription factor, MADS-box | Known |
Binding sites included in this analysis had DM ≤ 0.20. Among interacting domain pairs in all sites, 10 out of 15 (66.7%) pairs are reported in the DOMINE database