Table 1. General feature of the V. mimicus SX-4 genome.
N16691 | Simulated N16961 | SX-4 | Complete SX-4 (Simulated) | |
Genome | ||||
Size | 4033464 | 3924560 | 4273349 | 4391931.67 |
Contig Number (>1K) | - | 57 | 35 | - |
N50 | - | 335321 | 253803 | - |
G+C percentage | 47.49 | 47.5 | 46.25 | - |
Scaffold Number (1K) | 2 | 54 | 31 | - |
Paired read coverage (#) | - | 73.65 (3905736) | 69.86 (4034050) | - |
Single read coverage (#) | - | 66.11 (3546891) | 61.14 (3572283) | - |
Unmap read coverage(#) | - | 2.91 (153706) | 80.67 (4617101) | - |
Aver. Gap size | - | 39.33 | 88 | - |
Predicted CDS | ||||
CDS Numbers | 3836 | 3558 | 3903 | 4207.96 |
Average Size | 914.94 | 961.6 | 960.49 | 913.88 |
Percentage of Coding | 87.01% | 87.18% | 87.72% | 0.88 |
Truncated CDS | - | 351 | 384 | - |