Table 1. Predicted phenotypes of Env clones for which coreceptor usage was determined in the Trofile assay.
| ACS ID | Subject | n clones | Phenotype Trofile | Predicted phenotype (PSSM/g2p)a |
| H13912 | DS1 | 15 | R5 | nsi/r5 |
| 6 | Dual-X | si/x4 | ||
| H13988 | DS2 | 49 | R5 | nsi/r5 |
| 3 | Dual-X | si/x4 | ||
| H13845 | DS3 | 26 | R5 | nsi/r5 |
| 1 | R5 | si/x4 | ||
| 20 | Dual-R | nsi/r5 | ||
| 1 | Dual-R | si/r5 | ||
| 15 | Dual-X | si/x4 | ||
| H13951 | DS4 | 36 | R5 | nsi/r5 |
| 6 | Dual-R | nsi/r5 | ||
| 12 | Dual-X | si/x4 | ||
| H13993 | DS5 | 42 | R5 | nsi/r5 |
| 9 | Dual-X | si/x4 | ||
| H13885 | DS6 | n.a. | n.t. | n.t. |
| H13907 | DS7 | 19 | R5 | nsi/r5 |
| 4 | Dual-X | si/x4 | ||
| H13908 | DS8 | 17 | R5 | nsi/r5 |
| 3 | R5 | si/r5 | ||
| 2 | Dual-R | nsi/r5 | ||
| 8 | Dual-R | si/r5 | ||
| 2 | Dual-R | si/x4 | ||
| 1 | Dual-X | si/r5 | ||
| 5 | Dual-X | si/x4 | ||
| H13904 | DS9 | 46 | R5 | nsi/x4 |
| 3 | R5 | nsi/r5 | ||
| 1 | Dual-R | nsi/x4 | ||
| 10 | Dual-X | nsi/x4 | ||
| H13940 | DS10 | 6 | R5 | nsi/r5 |
| 9 | R5 | si/r5 | ||
| 11 | R5 | si/x4 | ||
| 17 | Dual-R | si/x4 | ||
| 1 | Dual-R | si/r5 | ||
| 5 | Dual-X | si/x4 |
a
Cutoffs for PSSM and g2p were −1.75 and 3.5%, respectively.
ACS ID, subject identifier of Amsterdam Cohort Studies; n, number; n.a., not applicable; n.t., not tested.