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. 2011 Apr 29;286(24):21697–21705. doi: 10.1074/jbc.M110.214056

TABLE 1.

Biochemical activities of FusR EF-G proteins (derived from wild-type E. coli EF-G)

Values represent the means ± S.D. from three or more separate reactions. ND, not detectable.

EF-G protein GTP binding affinity without ribosome (Kd or Km) GTP hydrolysis rate (k)a
Ribosome translocation rate (k)b
Without ribosome With ribosome
μm s1 s1 s1
Wild-type 6.6 ± 0.9c (5 ± 1) × 10−4 4.6 ± 0.4 1.8 ± 0.4
F95A 3.9 ± 0.3d (56 ± 9) × 10−4 ND 0.002 ± 0.001
D442A 2.4 ± 0.2d (162 ± 7) × 10−4 0.56 ± 0.02 0.044 ± 0.002
M461A 12 ± 1d (41 ± 4) × 10−4 1.18 ± 0.07 0.8 ± 0.1
L464A 14 ± 2c (15 ± 5) × 10−4 ND 0.033 ± 0.007
H465A 19 ± 2c (11 ± 3) × 10−4 0.36 ± 0.09 0.9 ± 0.4
I468A 13 ± 1d (29 ± 3) × 10−4 ND 0.046 ± 0.003
R472A 7.3 ± 0.9d (86 ± 2) × 10−4 ND 0.072 ± 0.007

a Reactions at 20 °C contained EF-G (0.4 μm), GTP (100 μm), and (when present) vacant E. coli ribosome (0.4 μm). Values represent kcat (GTPs hydrolyzed per EF-G/s) under steady-state conditions at saturating GTP concentration.

b Values are the rate of translocation of fluorescent pyrene-mRNA bound to the ribosome (Fig. 7b and supplemental Fig. 3). EF-G (2.5 μm) and GTP (1 mm) were rapidly mixed with pretranslocational ribosomes (0.25 μm) at 20 °C. Values represent the first-order reaction rate constants under pre-steady-state conditions.

c Kd for mant-GTP (without hydrolysis).

d Km for hydrolysis of mant-GTP.