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. 2011 Jun;18(6):893–900. doi: 10.1128/CVI.00066-11

Table 1.

Primer sequences, restriction enzymes and respective sites, and PCR amplification conditions

Gene Primera
Restriction site
Type Sequence (5′-3′)
sip Sense CGCGGATCCCAAGAAACAGATACGACG BamHI
Antisense GTACGCGGCCGCTTATTTGTTAAATGATACG NotI
sip-clfA Sense CCCGGATCCGTTAAACCAACTCAGACGTCAGTCA BamHI
Overlapping primer 1 TATTTGTTTTATCGATTTGGAGCCGCCGCCGCCGGAGCCGCCGCCGCCAACTTCATTACCAAGTGCT
Overlapping primer 2 GAGCACTTGGTAATGAAGTTGGCGGCGGCGGCTCCGGCGGCGGCGGCTCCCAAATCGATAAAACAAAT
Antisense CGCAAGCTTCTCTGGAATTGGTTCAATTTCACCA HindIII
a

The restriction sites are underlined. A 30-bp linker sequence of (G4S)2 flexible bridge (shown in boldface) was added to the overlapping primers for sip-clfA. The melting temperature for all primers was 56°C.