. 2011 May;49(5):1899–1906. doi: 10.1128/JCM.00235-10

Table 1.

Concordance of HPV detection with Merck multiplex HPV PCR and modified Linear Array following DNA extraction with the Qiagen Spin blood kit

Assay	No. of specimens with multiplex PCR/modified Linear Array result of:				Agreement rate	P_pos	P_neg	P value^a
Assay	+/+	+/−	−/+	−/−	Agreement rate	P_pos	P_neg	P value^a
HPV6	30	6	2	367	0.980	0.882	0.989	0.288
HPV11	9	1	0	395	0.998	0.947	0.999	1.000
HPV16	52	8	5	340	0.968	0.889	0.981	0.579
HPV18	25	6	1	373	0.983	0.877	0.991	0.131
HPV31	29	22	1	353	0.943	0.716	0.968	<0.001
HPV33	14	7	0	384	0.983	0.800	0.991	0.023
HPV35	19	5	2	379	0.983	0.844	0.991	0.450
HPV39	43	8	2	352	0.975	0.896	0.986	0.114
HPV45	13	3	1	388	0.990	0.867	0.995	0.617
HPV51	46	11	5	343	0.960	0.852	0.977	0.211
HPV52	32	15	0	358	0.963	0.810	0.979	<0.001
HPV56	29	17	0	359	0.958	0.773	0.977	<0.001
HPV58	25	6	0	374	0.985	0.893	0.992	0.041
HPV59	27	3	1	374	0.990	0.931	0.995	0.617
Any of the 14 HPVs	240	39	9	117	0.881	0.909	0.830	<0.001
β-globin	405	35	1	3	0.919	0.957	0.143	<0.001

P value as determined by McNemar's test. P values of <0.05 indicate significant differences (in boldface).