. 2011 May;49(5):1899–1906. doi: 10.1128/JCM.00235-10

Table 2.

Concordance of HPV detection with Merck multiplex HPV PCR and standard Linear Array following DNA extraction with the Qiagen Spin blood kit

Assay	No. of specimens with multiplex PCR/standard Linear Array result of:				Agreement rate	P_pos	P_neg	P value^a
Assay	+/+	+/−	−/+	−/−	Agreement rate	P_pos	P_neg	P value^a
HPV6	13	19	0	347	0.950	0.578	0.973	<0.001
HPV11	3	7	0	369	0.982	0.462	0.991	<0.001
HPV16	28	26	1	324	0.929	0.675	0.960	0.023
HPV18	9	20	0	350	0.947	0.474	0.972	<0.001
HPV31	6	39	0	334	0.897	0.235	0.945	<0.001
HPV33	1	18	0	360	0.953	0.100	0.976	<0.001
HPV35	9	14	0	356	0.963	0.563	0.981	<0.001
HPV39	9	39	0	331	0.897	0.316	0.944	<0.001
HPV45	7	6	3	363	0.976	0.609	0.988	0.505
HPV51	21	33	1	324	0.910	0.553	0.950	<0.001
HPV52	17	25	0	337	0.934	0.576	0.964	<0.001
HPV56	3	40	0	336	0.894	0.130	0.944	<0.001
HPV58	13	16	0	350	0.958	0.619	0.978	<0.001
HPV59	16	11	1	351	0.968	0.727	0.983	0.009
Any of the 14 HPVs	118	145	1	115	0.615	0.618	0.612	<0.001
β-globin	379	49	0	4	0.887	0.939	0.140	<0.001

P value as determined by McNemar's. P values of <0.05 indicate significant differences (in boldface).