. 2011 May;49(5):1899–1906. doi: 10.1128/JCM.00235-10

Table 4.

Concordance of HPV detection with Merck multiplex HPV PCR and standard Linear Array following DNA extraction with the Qiagen MinElute media kit

Assay	No. of specimens with multiplex PCR/standard Linear Array result of:				Agreement rate	P_pos	P_neg	P value^a
Assay	+/+	+/−	−/+	−/−	Agreement rate	P_pos	P_neg	P value^a
HPV6	24	3	0	140	0.982	0.941	0.989	0.248
HPV11	11	1	0	155	0.994	0.957	0.997	1.000
HPV16	44	3	1	119	0.976	0.957	0.983	0.617
HPV18	19	4	3	141	0.958	0.844	0.976	1.000
HPV31	18	4	2	143	0.964	0.857	0.979	0.683
HPV33	3	6	4	154	0.940	0.375	0.969	0.752
HPV35	2	1	9	155	0.940	0.286	0.969	0.027
HPV39	4	1	14	148	0.910	0.348	0.952	0.371
HPV45	10	3	4	150	0.958	0.741	0.977	1.000
HPV51	8	1	26	132	0.838	0.372	0.907	<0.001
HPV52	14	4	13	136	0.898	0.622	0.941	0.052
HPV56	3	1	12	151	0.922	0.316	0.959	0.006
HPV58	3	6	1	157	0.958	0.462	0.978	0.131
HPV59	0	0	18	149	0.892	0.000	0.943	<0.001
Any of the 14 HPVs	122	5	35	5	0.760	0.859	0.200	<0.001
β-globin	167	0	1	0	0.994	0.997	0.000	1.000

P value as determined by McNemar's test. P values of <0.05 indicate significant differences (in boldface).