Table 1.
CCF Acinetobacter isolates, source information, and species typing
| Isolate codea | Facility | Age of inmate | Sexd | Date of collection (mo/day/yr) | Species typingb | PFGE typec |
|---|---|---|---|---|---|---|
| CCF-52A | A | 45 | M | 2/28/2008 | A. baumannii | PT1 |
| CCF-124A | A | 48 | M | 8/14/2008 | A. baumannii | PT27 |
| CCF-55A | A | 48 | M | 2/22/2008 | A. baumannii | PT29 |
| CCF-104A | A | 45 | M | 6/27/2008 | A. baumannii | PT40a |
| CCF-43A | A | 48 | M | 1/25/2008 | A. baumannii | PT40a |
| CCF-92A | A | 23 | M | 6/14/2008 | A. baumannii | PT40a |
| CCF-40A | A | 47 | M | 1/16/2008 | A. baumannii (clone I) | PT30a |
| CCF-56A | A | 47 | M | 2/22/2008 | A. baumannii (clone I) | PT30b |
| CCF-63A | A | 47 | M | 3/1/2008 | A. baumannii (clone I) | PT30c |
| CCF-34A | A | 36 | M | 12/14/2007 | A. baumannii (clone II) | PT13 |
| CCF-11A | A | 30 | M | 9/22/2007 | A. baumannii (clone II) | PT70 |
| CCF-45A | A | 49 | M | 1/22/2008 | A. baumannii (clone II) | PT8a |
| CCF-46A | A | 49 | M | 1/22/2008 | A. baumannii (clone II) | PT8a |
| CCF-7A | A | 42 | M | 9/15/2007 | gen. sp. 13TU | PT21 |
| CCF-120A | A | 32 | M | 7/28/2008 | gen. sp. 14BJ | PT55 |
| CCF-101A | A | 29 | M | 7/15/2008 | gen. sp. 3 | PT46 |
| CCF-1A | A | 46 | M | 9/7/2007 | gen. sp. 3 | PT49 |
| CCF-96A | A | 48 | M | 6/2/2008 | gen. sp. 3 | PT67 |
| CCF-135B | B | 44 | M | 8/3/2008 | A. baumannii | PT24 |
| CCF-28B | B | 22 | M | 12/6/2007 | Closest to gen. sp. 14BJ | PT56 |
| CCF-6B | B | 46 | M | 9/11/2007 | gen. sp. 13TU | PT16 |
| CCF-42B | B | 51 | M | 1/19/2008 | gen. sp. 13TU | PT17 |
| CCF-74B | B | 21 | M | 5/1/2008 | gen. sp. 13TU | PT19 |
| CCF-32B | B | 31 | M | 11/17/2007 | gen. sp. 13TU | PT32 |
| CCF-2B | B | 42 | M | 9/10/2007 | gen. sp. 13TU | PT66 |
| CCF-73B | B | 31 | M | 4/28/2008 | gen. sp. 13TU | PT9 |
| CCF-17B | B | 22 | M | 10/18/2007 | gen. sp. 14TU | PT47 |
| CCF-91B | B | 72 | M | 6/6/2008 | gen. sp. 3 | PT2 |
| CCF-72B | B | 29 | M | 4/22/2008 | gen. sp. 3 | PT71 |
| CCF-134C | C | 40 | M | 8/8/2008 | A. baumannii | PT65 |
| CCF-117C | C | 42 | M | 8/22/2008 | A. baumannii | PT75 |
| CCF-54C | C | 35 | M | 2/26/2008 | A. baumannii (clone II) | PT10a |
| CCF-8C | C | 34 | M | 9/21/2007 | A. baumannii (clone II) | PT10a |
| CCF-94C | C | 35 | M | 6/2/2008 | A. baumannii (clone II) | PT10a |
| CCF-9C | C | 34 | M | 9/18/2007 | A. baumannii (clone II) | PT10a |
| CCF-61C | C | 35 | M | 2/7/2008 | A. baumannii (clone II) | PT10b |
| CCF-13C | C | 41 | M | 9/27/2007 | A. baumannii (clone II) | PT48 |
| CCF-22C | C | 34 | M | 11/3/2007 | gen. sp. 3 | PT52 |
| CCF-116D | D | 40 | M | 8/11/2008 | A. baumannii | PT31 |
| CCF-5D | D | 28 | M | 9/13/2007 | A. baylyi | PT34 |
| CCF-12D | D | 26 | M | 9/22/2007 | gen. sp. 3 | PT11 |
| CCF-4D | D | 65 | M | 9/15/2007 | gen. sp. 3 | PT15 |
| CCF-44E | E | 59 | F | 1/25/2008 | A. baumannii | PT61a |
| CCF-109E | E | 41 | F | 6/17/2008 | A. baumannii | PT64 |
| CCF-60E | E | 45 | F | 2/7/2008 | A. baumannii | PT68 |
| CCF-62E | E | 34 | F | 3/1/2008 | gen. sp. 13TU | PT4 |
| CCF-112E | E | 46 | F | 7/26/2008 | gen. sp. 3 | PT22 |
| CCF-16E | E | 45 | F | 10/18/2007 | gen. sp. 3 | PT25c |
| CCF-50E | E | 50 | F | 1/31/2008 | gen. sp. 3 | PT25d |
| CCF-26E | E | 36 | F | 12/11/2007 | gen. sp. 3 | PT39 |
| CCF-58E | E | 39 | F | 2/16/2008 | gen. sp. 3 | PT42 |
| CCF-10E | E | 35 | F | 9/21/2007 | gen. sp. 3 | PT57 |
| CCF-99F | F | 26 | F | 7/12/2008 | A. baumannii | PT23 |
| CCF-77F | F | 52 | M | 5/5/2008 | A. baumannii | PT24 |
| CCF-38F | F | 28 | M | 12/22/2007 | A. baumannii | PT74b |
| CCF-130F | F | 38 | M | 8/7/2008 | gen. sp. 3 | PFGE not available |
| CCF-14F | F | 55 | M | 10/1/2007 | gen. sp. 3 | PT38 |
| CCF-65G | G | 27 | F | 3/10/2008 | A. baumannii | PT20 |
| CCF-75G | G | 47 | F | 5/2/2008 | A. baumannii | PT61b |
| CCF-47G | G | 24 | F | 1/21/2008 | A. baumannii | PT63a |
| CCF-98G | G | 26 | F | 7/12/2008 | A. baumannii (clone II) | PT77 |
| CCF-131G | G | 33 | F | 7/31/2008 | gen. sp. 13TU | PT44 |
| CCF-132G | G | 33 | F | 7/31/2008 | gen. sp. 13TU | PT44 |
| CCF-64G | G | 31 | F | 3/4/2008 | gen. sp. 13TU | PT59 |
| CCF-115G | G | 43 | F | 7/21/2008 | gen. sp. 3 | PT25a |
| CCF-128G | G | 42 | F | 8/11/2008 | gen. sp. 3 | PT26 |
| CCF-18G | G | 30 | F | 10/22/2007 | gen. sp. 3 | PT28 |
| CCF-21G | G | 21 | F | 10/6/2007 | gen. sp. 3 | PT36 |
| CCF-81G | G | 26 | F | 6/2/2008 | gen. sp. 3 | PT43 |
| CCF-111G | G | 30 | F | 7/8/2008 | gen. sp. 3 | PT76 |
| CCF-19H | H | 71 | M | 11/2/2007 | A. baumannii | PT69 |
| CCF-27H | H | 72 | M | 12/11/2007 | A. baumannii | PT69 |
| CCF-102I | I | 28 | M | 7/7/2008 | A. baumannii | PT24 |
| CCF-83I | I | 29 | M | 5/27/2008 | A. baumannii | PT6 |
| CCF-84I | I | 29 | M | 5/27/2008 | A. baumannii | PT6 |
| CCF-37I | I | 45 | M | 12/21/2007 | A. baumannii (clone II) | PT7 |
| CCF-23I | I | 19 | M | 10/5/2007 | gen. sp. 13TU | PT18 |
| CCF-85I | I | 45 | M | 5/23/2008 | gen. sp. 3 | PT51 |
| CCF-78J | J | 47 | M | 5/8/2008 | A. baumannii | PFGE not available |
| CCF-87J | J | 66 | M | 5/19/2008 | A. baumannii | PT3 |
| CCF-106J | J | 29 | M | 6/24/2008 | gen. sp. 14BJ | PT33 |
| CCF-20J | J | 34 | M | 11/3/2007 | gen. sp. 14BJ | PT33 |
| CCF-69K | K | 36 | M | 3/25/2008 | A. baumannii | PT24 |
| CCF-76K | K | 33 | M | 5/9/2008 | A. baumannii | PT60 |
| CCF-49K | K | 40 | M | 1/19/2008 | A. baumannii | PT63b |
| CCF-24K | K | 44 | M | 11/8/2007 | gen. sp. 3 | PT25b |
| CCF-57K | K | 32 | M | 2/19/2008 | gen. sp. 3 | PT45 |
| CCF-119K | K | 57 | M | 8/1/2008 | Sequencing failed | PT25a |
| CCF-90L | L | 38 | M | 5/17/2008 | A. baumannii | PT24 |
| CCF-79L | L | 48 | M | 5/1/2008 | A. baumannii | PT53a |
| CCF-80L | L | 48 | M | 5/1/2008 | A. baumannii | PT53a |
| CCF-136L | L | 58 | M | 8/2/2008 | A. baumannii | PT53b |
| CCF-125L | L | 52 | M | 8/14/2008 | A. baumannii | PT62 |
| CCF-123L | L | 49 | M | 8/14/2008 | A. baumannii | PT73 |
| CCF-103L | L | 52 | M | 7/25/2008 | gen. sp. 14BJ | PT35 |
| CCF-95L | L | 32 | M | 6/6/2008 | gen. sp. 3 | PT37 |
| CCF-89L | L | 48 | M | 5/17/2008 | Sequencing failed | PFGE not available |
| CCF-82M | M | 39 | M | 5/27/2008 | A. baumannii | PT40a |
| CCF-108M | M | 64 | M | 6/23/2008 | A. baumannii | PT40b |
| CCF-121M | M | 31 | M | 8/23/2008 | A. baumannii | PT50 |
| CCF-86M | M | 42 | M | 5/20/2008 | A. baumannii | PT78 |
| CCF-59M | M | 48 | M | 2/12/2008 | A. baumannii | PT8b |
| CCF-70M | M | 35 | M | 3/29/2008 | A. baumannii (clone II) | PT5 |
| CCF-88M | M | 41 | M | 5/17/2008 | A. baumannii (clone II) | PT72 |
| CCF-93M | M | 49 | M | 6/9/2008 | A. baumannii (clone III) | PT79 |
| CCF-126M | M | 45 | M | 8/12/2008 | gen. sp. 13TU | PT58 |
| CCF-66M | M | 40 | M | 3/18/2008 | gen. sp. 3 | PT14 |
| CCF-29M | M | 37 | M | 11/28/2007 | gen. sp. 3 | PT67 |
| CCF-31M | M | 45 | M | 11/19/2007 | gen. sp. 3 | PT67 |
| CCF-30N | N | 55 | M | 11/20/2007 | A. baumannii | PT64 |
| CCF-67N | N | 48 | M | 3/21/2008 | A. baumannii | PT74a |
| CCF-39O | O | 55 | M | 12/22/2007 | A. baumannii | PFGE not available |
| CCF-36O | O | 47 | M | 12/22/2007 | A. baumannii | PT41 |
| CCF-53P | P | 40 | M | 2/28/2008 | A. calcoaceticus | PFGE not available |
| CCF-33Q | Q | 21 | M | 12/14/2007 | A. baumannii | PT24 |
| CCF-129Q | Q | 31 | M | 8/8/2008 | A. baumannii | PT78 |
| CCF-68Q | Q | 45 | M | 3/22/2008 | A. baumannii | PT78 |
| CCF-97Q | Q | 31 | M | 7/18/2008 | A. baumannii | PT78 |
| CCF-127R | R | 23 | F | 8/12/2008 | A. baumannii | PT54 |
| CCF-71R | R | 32 | F | 4/7/2008 | A. baumannii | PT61a |
| CCF-25R | R | 39 | F | 10/18/2007 | A. baumannii (clone II) | PT12 |
| CCF-118S | S | 77 | M | 8/21/2008 | A. baumannii | PFGE not available |
| CCF-114S | S | 46 | M | 7/24/2008 | A. baumannii | PT24 |
a
For ease of tracking, each isolate code ends with a letter corresponding to the one-letter designation of the facility from which it was isolated.
b
Species of the Acinetobacter isolates were identified by ITS sequencing (gen. sp. 3, genomic species 3; gen. sp. 13TU, genomic species 13TU; gen. sp. 14TU, genomic species 14TU; gen. sp. 14BJ, genomic species 14BJ) (7). European clone designations (in parentheses) were determined by trilocus multiplex PCR (63).
c
PFGE types (PTs) were assigned to isolates with at least a six-band difference according to the rules of Tenover and colleagues (61), with subtypes being assigned to isolates of similar profiles.
d
M, male; F, female.