Table 2.
Ribosomal proteins used as markers of ribosomal evolution in the urancestor
| SCOP ID | FSF | r-proteins | SCOP fold superfamily | min_set | max_set |
|---|---|---|---|---|---|
| 50249 | b.40.4 | S12, S17 | Nucleic acid-binding proteins | + | + |
| 54211 | d.14.1 | S9 | Ribosomal protein S5 domain 2-like | + | + |
| 50447 | b.43.3 | L3 | Translation proteins | + | + |
| 50104 | b.34.5 | L2, L24 | Translation proteins SH3-like domain | + | + |
| 55174 | d.66.1 | S4 | Alpha-L RNA-binding motif | - | + |
| 46946 | a.156.1 | S13 | S13-like H2TH domain | - | + |
| 56053 | d.141.1 | L6 | Ribosomal protein L6 | - | + |
| 57716 | g.39.1 | S14 | Glucocorticoid receptor-like (DNA-binding domain) | - | + |
| 53137 | c.55.4 | L18, S11 | Translational machinery components | - | + |
| 54768 | d.50.1 | S5 | dsRNA-binding domain-like | - | + |
| 48300 | a.108.1 | L7, L12 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain | - | + |