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. 2011 Jun 7;4:98. doi: 10.1186/1756-3305-4-98

Table 1.

Probes and primers used in this study

Primer Oligonucleotides Sequences(5`-3`)
CsPLaw PaACATACATGTAGAACATGACGGGTTCGGGCAATTCGTTATTGGCCCTATAGTGAGGTCTTCTCTATTGTCACCGTATGCACATCTCGGAATCAAGCTGg

CsPLfw hACTGGATTCAGGTTCACGAAGCTGCATTATCGATCAGTACCAGTGTAGTACAGCGCCGGTGAAATTATCGCCACAGGCCTTTCTGCAGCATGCATGCGGAb

OfPLaw PcCTATACATGTAGAATATGACGGAGTTCGGGCAATTCGTTATTGGCCCTATAGTGAGGTCTTCTCTATTGTCACCGTATGCACATCTCGGAATCAAGCTGg

OfPLfw hACTGGATTCAGGTTCACGAAGCTGCATTATCGATCAGTTATCGCCACAGGCCTTTAACGCTGCAGCATGTATGTd

OvPLaw PeTTATACATGTAGGTTATACATGACGTTCGGGCAATTCGTTATTGGCCCTATAGTGAGGTCTTCTCTATTGTCACCGTATGCACATCTCGGAATCAAGCTGg

OvPLfw hACTGGATTCAGGTTCACGAAGCTCAGGCCTTTAACGCTGCAGCATGTATGGf

pF3 Fam-CAGCTTAGTTCCGAGATGT

pB3 ACTGGATTCAGGTTCACGA

Cs-T CCGTCATGTTCTACATGTATGTTCCGCATGCATGCTGCAG

Of-T TCCGTCATATTCTACATGTATAGACATACATGCTGCAGCGTT

Ov-T GTCATGTATAACCTACATGTATAACCATACATGCTGCAGCGTT

ITS1f CGATTCTAGTTCCGTCATCT

ITS1r CCGCTCAGAGTTGTACTCAT

a-f: complementary sequence of ITS loci in padlock probes, denoted with italics and bold.

g: pF3 binding sequence in underline and bold.

h: pB3 binding sequence in underline.

P: phosphorylated

Fam: Fam fluorescent labled at the 5' end.