Table 1.
Probes and primers used in this study
Primer | Oligonucleotides Sequences(5`-3`) |
---|---|
CsPLaw | PaACATACATGTAGAACATGACGGGTTCGGGCAATTCGTTATTGGCCCTATAGTGAGGTCTTCTCTATTGTCACCGTATGCACATCTCGGAATCAAGCTGg |
CsPLfw | hACTGGATTCAGGTTCACGAAGCTGCATTATCGATCAGTACCAGTGTAGTACAGCGCCGGTGAAATTATCGCCACAGGCCTTTCTGCAGCATGCATGCGGAb |
OfPLaw | PcCTATACATGTAGAATATGACGGAGTTCGGGCAATTCGTTATTGGCCCTATAGTGAGGTCTTCTCTATTGTCACCGTATGCACATCTCGGAATCAAGCTGg |
OfPLfw | hACTGGATTCAGGTTCACGAAGCTGCATTATCGATCAGTTATCGCCACAGGCCTTTAACGCTGCAGCATGTATGTd |
OvPLaw | PeTTATACATGTAGGTTATACATGACGTTCGGGCAATTCGTTATTGGCCCTATAGTGAGGTCTTCTCTATTGTCACCGTATGCACATCTCGGAATCAAGCTGg |
OvPLfw | hACTGGATTCAGGTTCACGAAGCTCAGGCCTTTAACGCTGCAGCATGTATGGf |
pF3 | Fam-CAGCTTAGTTCCGAGATGT |
pB3 | ACTGGATTCAGGTTCACGA |
Cs-T | CCGTCATGTTCTACATGTATGTTCCGCATGCATGCTGCAG |
Of-T | TCCGTCATATTCTACATGTATAGACATACATGCTGCAGCGTT |
Ov-T | GTCATGTATAACCTACATGTATAACCATACATGCTGCAGCGTT |
ITS1f | CGATTCTAGTTCCGTCATCT |
ITS1r | CCGCTCAGAGTTGTACTCAT |
a-f: complementary sequence of ITS loci in padlock probes, denoted with italics and bold.
g: pF3 binding sequence in underline and bold.
h: pB3 binding sequence in underline.
P: phosphorylated
Fam: Fam fluorescent labled at the 5' end.