Table 2. PCR-detection of island-like genomic regions in P. acnes isolates.
1 (a) | 1 (b) | 2 (a) | 2 (b) | 3 (a) | 3 (b) | 4 (a) | 4 (b) | ||
strain | phylotype | ||||||||
266 | + | + | I-1a/ST18 | ||||||
SK137 | I-1a/new ST | ||||||||
SK187 | + | + | + | + | I-1a/new ST | ||||
KPA171202 | + | + | + | + | + | + | + | + | I-2/ST34 |
J139 | + | + | + | + | II/new ST | ||||
1.4.L1 | + | + | I-1a/ST18 | ||||||
12.1.L1 | + | + | I-1a/ST18 | ||||||
32.1.L1 | + | + | I-1a/ST18 | ||||||
4.1.A1 | + | + | I-1a/ST20 | ||||||
12.1.R1 | + | + | I-1a/ST20 | ||||||
19.1.R1 | + | + | + | + | + | + | I-1a/ST21 | ||
3.5.R1 | + | + | + | + | I-1a/ST27 | ||||
2.3.A1 | + | + | + | + | + | + | + | + | I-2/ST35 |
21.1.L1 | + | + | + | + | + | + | + | + | I-2/ST36 |
3.3.R1 | + | + | + | + | + | + | + | + | I-2/ST36 |
10.1.R1 | + | + | II/ST52 | ||||||
34.1.A1 | + | + | II/ST54 | ||||||
CCUG35547 | + | + | + | + | III/ST44 | ||||
CCUG35900 | + | + | + | + | III/ST43 | ||||
P6 | + | + | + | + | + | + | + | + | I-2/ST33 |
Two PCRs (a and b) per island were performed to check for the presence of the four main genomic islands in the listed human isolates (islands in SK137, SK187 and J139 were predicted from their genomes).