Table 2.
Listing of the 10 genes with the greatest change in expression in the human colon during acute E. histolytica colitis compared to convalescence. RNA was isolated from colonic biopsy samples, and gene transcripts were analyzed for microarray using the Affymetrix Human GeneChip® 1.0 ST chips.
| Day 1 mean expression (Log2) (±SEM) | Day 60 mean expression (Log2) (±SEM) | Fold change | p-value | |
|---|---|---|---|---|
| REG1B | 9 (1.02) | 5.59 (0.23) | 10.65 | 0.006 |
| REG1A | 10.69 (0.76) | 7.8 (0.22) | 7.4 | 0.003 |
| MMP3 | 8.04 (0.73) | 5.49 (0.17) | 5.86 | 0.004 |
| S100A8 | 8.28 (0.87) | 6.08 (0.17) | 4.59 | 0.026 |
| MMP1 | 8.85 (0.62) | 6.8 (0.26) | 4.14 | 0.008 |
| DMBT1 | 11.43 (0.22) | 9.51 (0.46) | 3.8 | 0.002 |
| CHI3L1 | 8.3 (0.50) | 6.48 (0.19) | 3.54 | 0.004 |
| AQP8 | 8.89 (0.67) | 10.6 (0.33) | 3.28 | 0.039 |
| SLC26A2 | 9.59 (0.56) | 11.11 (0.17) | 2.88 | 0.022 |
| OLFM4 | 12.16 (0.25) | 10.76 (0.38) | 2.64 | 0.009 |