Table 1.
U-labeled |
A-labeled |
|||||
---|---|---|---|---|---|---|
pmcm5Ub | pmcm5Umb | pψc | pm1Ad | pi6Ae | ||
GCCA[WT] | I | ± | + | + | + | − |
GCCA[WT] | II | ++ | ± | + | ± | + |
ACCA | I | ++ | − | + | + | − |
ACCA | II | ++ | − | + | ± | + |
CCCA | I | ++ | − | + | + | − |
CCCA | II | ++ | − | + | ± | + |
UCCA | I | ++ | − | + | + | − |
UCCA | II | ++ | − | + | ± | + |
GCCA[WT] | I | ± | + | + | + | − |
GCCA[WT] | II | ++ | ± | + | + | + |
GCCA[WT] +SB−217452 |
I | ++ | − | + | + | − |
GCCA[WT] +SB−217452 |
II | ++ | − | + | + | + |
The amount of each modified nucleotide was calculated using a PhosphorImager and is relative to the amount of pU or pA.
++: 15–25 %; +: 5–15 %; ±: 1–5 %; −: < 1 % of pU.
+: 15–25 % of pU.
+: 10–20 %; ±: 1–10 % of pA.
+: 35–55 %; −: < 1 % of pA.