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. 2011 Jun 28;6(6):e21606. doi: 10.1371/journal.pone.0021606

Figure 1. Schematic depiction of the maximum likelihood alignment procedure.

Figure 1

An imaginary ‘two-state’ signal is shown in red. The low-pass filtered observation sequence (black trace) is used to produce the initially decoded Viterbi state sequence (green trace) with state transition times t1, t2, and t3 indicated by the vertical black dashed lines. These transition times are aligned to the broadband observation sequence (red trace) by maximizing the likelihood of a set of perturbations δi on the initial state transition times given the broadband observation sequence. Maximum likelihood values of the aligned transition times are then given by the set of times {tii*}, indicated by the red vertical dashed lines. For the signal features used in the majority of the analysis, perturbations of up to ±150 ms were determined to be sufficient; however when exploring a large range of filtering parameters we allowed perturbations of up to ±300 ms on the state transitions.