Table 1. The data of essential genes used in the current study.
Organism | RefSeq | No. of total genes | No. of essential genes | References |
Acinetobacter sp. ADP1 | NC_005966 | 3307 | 499 | [26] |
Bacillus subtilis subsp. subtilis str. 168 | NC_000964 | 4176 | 271 | [10] |
Escherichia coli K12 | NC_000913 | 4144 | 700a | [27], [28] |
Francisella tularensis subsp. novicida U112 | NC_008601 | 1719 | 390 | [35] |
Haemophilus influenzae Rd KW20 | NC_000907 | 1657 | 462 | [32] |
Helicobacter pylori 26695 | NC_000915 | 1573 | 322b | [36] |
Mycobacterium tuberculosis H37Rv | NC_000962 | 3988 | 614 | [37] |
Mycoplasma genitalium G37 | NC_000908 | 475 | 378c | [38] |
Mycoplasma pulmonis UAB CTIP | NC_002771 | 782 | 310 | [39] |
Pseudomonas aeruginosa UCBPP-PA14 | NC_008463 | 5892 | 335 | [40] |
Salmonella enterica subsp. enterica serovar Typhi Ty2 | NC_004631 | 4314 | 353 | [41] |
Salmonella typhimurium LT2 | NC_003197 | 4423 | 230 | [42] |
Staphylococcus aureus subsp. aureus N315 | NC_002745 | 2583 | 302 | [29], [30], [31] |
Staphylococcus aureus subsp. aureus NCTC 8325 | NC_007795 | 2892 | 351 | [43] |
Note that for the genome of NC_000913, ten essential genes without GI numbers and two essential genes with dead GI numbers (16129191 and 16130842) were excluded.
Note that for the genome of NC_000915, one essential gene with dead GI number (15644641) was excluded.
Note that for the genome of NC_000908, two essential genes without GI numbers and one essential gene with dead GI number (13277519) were excluded.