Table 5.
Comparison of Prediction Models for Identifying Mismatch Repair Gene Mutation Carriers
Characteristic | Barnetson, et al.21 (MMRpredict) |
Chen, et al.24 (MMRpro) |
Balmaña, et al.13 (PREMM1,2) |
Kastrinos, et al. (PREMM1,2,6) |
---|---|---|---|---|
Ascertainment | ||||
Derivation | Population-based restricted to age <50 years at CRC diagnosis | Population- and Clinic-based | Clinic-based | Clinic-based |
Validation | Population-based | Clinic-based | Clinic-based | Population- and Clinic-based |
Genotype detection | ||||
MLH1 | 19 exons | Variable, not specified | 19 exons | 19 exons |
MSH2 | 16 exons | 16 exons | 16 exons | |
MSH6 | 10 exons | Not performed | 10 exons | |
Deletion testing* | Yes | Yes** | Yes | |
Total germline-tested individuals: | ||||
Derivation cohort | 870 | N/A | 898 | 4538 |
Validation cohort | 155 | 144 | 1016 | 1827 |
Total families tested | Not specified | 226 | 1914 | 4538 |
Related individuals tested | Yes | Yes | No | No |
Total mutations | 38 | 121 | 285 | 525 |
MLH1 | 15 | 51 | 112 | 204 |
MSH2 | 16 | 63 | 173 | 250 |
MSH6 | 7 | 7 | N/A | 71 |
Molecular testing included | Yes | Yes | No | No |
Gene-specific estimates given | No | Yes§ | No | Yes |
N/A= not available
Deletion testing for MLH1 and MSH2 genes
N=1016
Estimates provided without evidence for model’s performance