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. 2011 Jun;79(6):2412–2422. doi: 10.1128/IAI.01120-10

Table 2.

Primers used for real-time PCR in elemental mixturea

MAC strain 104 gene M. tuberculosis H37Rv gene Primer sequence Reference
Mav1094 Rv0981 5′CTGGAAATGCTGATCGCCAACC3′ He et al. (18)
5′TCACGGCGGCGTCTCCCGAAGCACGTA3′
Mav3301 Rv1477 5′ATGAGACGCACACGCTGG3′ Gao et al. (15a)
5′CTTGTTGACGCTTTCCTG3′
Mav4487 Rv1818c 5′ATGTCGTTCGTTCAAGCGACTC3′ Brennan et al. (8)
5′GTTCATCAACTGCACGAACTGG3′
Mav1365 Rv1221 5′GATCTCCTCATACGACAG3′ Manganelli et al. (28)
5′GACCTTCATCCGGGTGTTC3′
Mav5014 Rv0170 5′CAGACTCAGCATCTTCTC3′ Haile et al. (16a)
5′GTCGACCAGCTGCACCGAAC3′
Mav3270 Rv1592 5′ATGGCAACCGAACTCCGAAAG3′ Danelishvili et al. (11)
5′GAAAACGAAACGACGGGTCGT3′
Mav2420 Rv3902 5′CACTTGGTGGAGGTGCACCCGACTC3′ Danelishvili et al. (11)
5′GGACGTGATGTTTCCGCTTATTC3′
Mav1600 5′ATGTCCGACACCACAACAG3′ Plum et al. (32a)
5′CTTCGACGAATTCGTTCCC3′
Mav0996 Rv0867 5′CACCACTTCCAGTGTCAG3′ Hou et al. (19)
5′GTGTTGATGCCCCAGTTG3′
Mav0660 Rv3496 5′GACTGTTTGACCTCGTCCCAC3′ Hou et al. (19)
5′GTGTATGTGCTGACGTCGCAAG3′
Mav2409 Rv2096c 5′GTGGGCAGTCTTAGTCCGTG3′ Hou et al. (19)
5′CTTGAAGATCCGCATCGACTT3′
Mav1424 Rv1275 5′CTGACGGGCTGTTCCCGCTCG3′ Danelishvili et al. (10)
5′CTAGGAATTGGTCGCCAGCGT3′
Mav0467 Rv3663 5′ATGACCACCCCGCTGCTGTCG3′ Danelishvili et al. (10)
5′GCCACCTGGTCGACGAGGTCG3′
Mav3275 Rv1497 5′GCTGGAGCTGGCCGA3′ Danelishvili et al. (10)
5′CGGCACGTACAGGTTTCGGTC3′
Mav2928 Rv1787 5′ACGAATTCACGGTGTTTGACTTCGGAGCG3′ Li et al. (26a)
5′ACAAGCTTGTGGACTCTCGGTCGTGTTGAGG3′
Mav4781 Rv0359 5′CGGCTGGCTGGTGTCGCTGTG3′ Danelishvili et al. (10)
5′ACGCCGGAGAAGTCGAAC3′
Mav2036 Rv2359 5′CGACGGGGCAGGAGTCAG3′ Milano et al. (30)
5′ATGGTGTGGCTGACGTCGGAGAA3′
Mav4357 Rv3412 5′GACCACCTCCCACCGGGTTT3′ Danelishvili et al. (10)
5′TTGAGTGAGGCGTCGGCGTAG3′
a

Primers used for real-time PCR in the 24-h elemental mixture, along with the nearest M. tuberculosis homolog and reference in which the genes have been proven to be upregulated when Mycobacterium avium complex (MAC) is inside cells.