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. 2011 Apr;85(8):3811–3820. doi: 10.1128/JVI.02275-10

Fig. 2.

Fig. 2.

Phylogenetic analysis of the available sequences of phlebovirus L ORF. A set of 66 L phlebovirus sequences comprising all partial or complete sequences from GenBank available on 1 October 2010 were aligned using the CLUSTAL algorithm (as implemented in the MEGA package version 3) at the amino acid level with additional manual editing to ensure the highest possible quality of alignment. NJ analysis at the amino acid level was performed due to the observed high variability of the underlying nucleotide sequences. The statistical significance of tree topology was evaluated by bootstrap resampling of the sequences 1,000 times. Phylogenetic analyses were performed using MEGA software (33). Sequences marked with black dots corresponded to partial sequences.