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. 2011 Jul;85(13):6535–6547. doi: 10.1128/JVI.02433-10

Table 3.

Primer sequences used for dsRNA production, RT-PCR, and real-time RT-PCR analysis

Gene name Primer name (sequence [5′–3′]) Usage
ie1 IE1-F (GAAGACTCTACAAATCTCTTT) dsRNA production
IE1-R (CTTGCACCTACACGCATTACA) dsRNA production
IE1-T7-F (GGATCCTAATACGACTCACTATAGGGAAGACTCTACAAATCTCTTT) dsRNA production
IE1-T7-R (GGATCCTAATACGACTCACTATAGGCTTGCACCTACACGCATTACA) dsRNA production
PmTBP PmTBP-F (CTGGAATGTTCGGTTCAGCC) dsRNA production
PmTBP-R (GGCTTCGTAAATCTGGTTTC) dsRNA production
PmTBP-T7-F (GGATCCTAATACGACTCACTATAGGCTGGAATGTTCGGTTCAGCC) dsRNA production
PmTBP-T7-R (GGATCCTAATACGACTCACTATAGGGGCTTCGTAAATCTGGTTTC) dsRNA production
EGFP EGFP-F (ATGGTGAGCAAGGGCGAGG) dsRNA production
EGFP-R (TTACTTGTACAGCTCGTCCAT) dsRNA production
EGFP-T7-F (GGATCCTAATACGACTCACTATAGGATGGTGAGCAAGGGCGAGG) dsRNA production
EGFP-T7-R (GGATCCTAATACGACTCACTATAGGTTACTTGTACAGCTCGTCCAT) dsRNA production
ie1 CGCGGATCCATGGCCTTTAATTTTGAAGAC RT-PCR
TCCCCGCGGTACAAAGAATCCAGAAATCTC RT-PCR
EF-1α GGAGATGCACCACGAAGCTC RT-PCR
TTGGGTCCGGCTTCCAGTTC RT-PCR
PmTBP GCAGCAGGGTCAGCAGATG Real-time RT-PCR
CATTAAGGTGTGTGGCGTGAAC Real-time RT-PCR
dnapol TCCAGCTCCATCACCCTCTT Real-time RT-PCR
TGAATTTGGAATTGGTGTCGTAGA Real-time RT-PCR
EF-1α TGCTCTGGACAACATCGAGC Real-time RT-PCR
CGGGCACTGTTCCAATACCT Real-time RT-PCR