Table 1.
Comparison of CB3-Nancy and CB3-RD nucleotide and amino acid sequences
| Gene | Position (nt) | CB3-Nancya |
CB3-RDa |
||
|---|---|---|---|---|---|
| nt | aa | nt | aa change | ||
| 5′ UTR | 125 | G | - | A | - |
| 474 | C | - | C(T) | - | |
| 511 | T | - | T(A) | - | |
| 529 | T(C) | - | T | - | |
| 578 | G | - | A | - | |
| 586 | T(C) | - | T | - | |
| VP2 | 987 | C | A | T | V |
| 1380 | C | A | T | V | |
| VP3 | 1861 | G | K | A | - |
| 2011 | C | Y | C(T) | - | |
| 2430 | C | T | T | I | |
| 2432 | T | S | A | T | |
| 2438 | G | E | C | Q | |
| VP1 | 2726 | T | L | A | I |
| 2A | 3496 | C | S | A | - |
| 2C | 4044 | A | N | A(G) | -(S) |
| 3C | 5485 | C | A | C(T) | - |
| 5893 | C | H | T | - | |
| 3D | 6478 | G | Q | G(A) | - |
| 7163 | T | L | C | - | |
| 3′ UTR | 7334 | C | - | T | - |
a
Parentheses indicate residues in the cDNA clone that differ from the consensus sequence determined for each virus; hyphens indicate no change. aa, amino acid.