Table 1.
Summary of GS20-454 sequencing and BLASTN resultsa
| Comparison | Total no. of reads | No. of positive BLASTN hitsb | No. of different gene modelsc |
|---|---|---|---|
| TT bc | 53,202 | 43,268 | 4,999 |
| TT c | 104,678 | 85,030 | 6,260 |
| TR bc | 46,009 | 36,899 | 4,554 |
| TR c | 73,880 | 51,462 | 5,359 |
a
Number of sequences obtained after pyrosequencing and BLASTN analysis of the transcriptomes 1 cm before direct contact of T. atroviride IMI206040 with R. solani (TR bc), during 1 cm of direct contact (TR c), and under the corresponding control conditions of T. atroviride against itself 1 cm before contact (TT bc) and during direct contact (TT c).
b
Number of reads with hits (E value of <10e−5) against T. atroviride gene models.
c
Number of distinct T. atroviride gene models represented by transcriptomes during mycoparasitic interactions.