Table 3.
Gene selection for RT-qPCR
| Transcript ID/ protein ID | KOG ID | KOG description | KOG function(s) | KOG category |
|---|---|---|---|---|
| 302419 | KOG1153 | Subtilisin-related protease/vacuolar protease B | Posttranslational modification, protein turnover, chaperones | Cellular processes and signaling |
| 297887 | KOG1339 | Aspartyl protease | Posttranslational modification, protein turnover, chaperones | Cellular processes and signaling |
| 80187 | KOG4157 | Beta-1,6-N-acetylglucosaminyltransferase; contains the WSC domain | Posttranslational modification, protein turnover, chaperones | Cellular processes and signaling |
| 286914 | KOG0251 | Clathrin assembly protein AP180 and related proteins; contain the ENTH domain | Signal transduction mechanisms | Cellular processes and signaling |
| 149807 | KOG0519 | Sensory transduction histidine kinase | Signal transduction mechanisms | Cellular processes and signaling |
| 223683 | KOG1517 | Guanine nucleotide binding protein MIP1 | Cell cycle control, cell division, chromosome partitioning | Metabolism |
| 211243 | KOG0054 | Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily | Secondary metabolite biosynthesis, transport, and catabolism | Metabolism |
| 298187 | KOG3627 | Trypsin | Amino acid transport and metabolism | Metabolism |
| 318101 | KOG0039 | Ferric reductase, NADH/NADPH oxidase, and related proteins | Inorganic ion transport and metabolism | Metabolism |
| 132506 | KOG1227 | Putative methyltransferase | General function; prediction only | Poorly characterized |
| 302587 | ||||
| 84753 | ||||
| 22871 |