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. 2011 Mar;13(2):220–232. doi: 10.1016/j.jmoldx.2010.10.008

Table 3.

PCR Thermocycling Conditions

PCR type Step Conditions
Multiplex-PCR Initial denaturation 98°C for 30 s
Thermocycling: 35 cycles 98°C for 10 s
55°C for 20 s
72°C for 20 s
Extension 72°C for 15 s
Nested conventional PCR Initial denaturation 98°C for 30 s
Thermocycling: 35 cycles 98°C for 10 s
Ta for 30 s
72°C for 10 s
Nested fast-COLD-PCR Initial denaturation 98°C for 30 s
Stage 1 cycling: 5 cycles 98°C for 10 s
Ta for 20 s, fluorescent reading
72°C for 10 s
Stage 2 cycling: 20 cycles Tc for 10 s
Ta for 20 s, fluorescent reading
72°C for 10 s
Stage 3 cycling: 10 cycles 98°C for 10 s
Ta for 20 s, fluorescent reading
72°C for 10 s
Melting curve Ramping 0.2°C/s, 60°C to 90°C

Annealing temperatures and critical denaturation temperatures are defined in Table 2.