Table 2.
Genome segments | Isolates | GenBank accession number | DNA size (nt) | TATA box positiona | ORF | Polyadenylation signal position(s)a | |||
---|---|---|---|---|---|---|---|---|---|
Predicted ORFa, b | Initiation codon context | No. amino acids | Protein size (kDa) | ||||||
DNA-R | Mor5 | GQ274033 | 1,003 | 55–61 | 101–958 | AATATGG | 286 | 33.2 | 93–98 |
Mor23 | GQ274025 | 1,003 | 55–62 | 101–958 | AATATGG | 286 | 33.2 | 93–98 | |
DNA-S | Mor5 | GQ274036 | 990 | 244–250 | 285–800 | AAAATGG | 172 | 19.1 | 838–843 |
Mor23 | GQ274028 | 1,004 | 265–270 | 306–821 | AAAATGG | 172 | 19.0 | 852–857 | |
DNA-M | Mor5 | GQ274035 | 984 | 260–265 | 326–661 | ACGATGT | 112 | 12.7 | 665–672/684–689 |
Mor23 | GQ274027 | 989 | 259–264 | 322–663 | TCCATGG | 114 | 12.9 | 719–724 | |
DNA-C | Mor5 | GQ274031 | 988 | 255–261 | 295–801 | GAAATGG | 169 | 19.8 | 812–817 |
Mor23 | GQ274023 | 992 | 255–260 | 296–802 | AAGATGG | 169 | 19.9 | 814–821 | |
DNA-N | Mor5 | GQ274038 | 1,005 | 252–257 | 360–818 | AAAATGG | 153 | 17.5 | 845–850 |
Mor23 | GQ274030 | 987 | 295–301 | 345–803 | AAAATGG | 153 | 17.4 | 835–841 | |
DNA-U1 | Mor5 | GQ274034 | 980 | 255–261 | 347–778 | TAGATGC | 144 | 16.9 | 787–792/809–814 |
Mor23 | GQ274026 | 992 | 254–259 | 342–806 | GTTATGG | 155 | 17.7 | 816–821/824–829 | |
DNA-U2 | Mor5 | GQ274037 | 978 | 260–266 | 326–688 | TTGATGG | 121 | 14. 4 | 686–691/715–720 |
Mor23 | GQ274029 | 989 | 259–264 | 336–707 | AAGATGC | 124 | 15.2 | 714–719 | |
DNA-U4 | Mor5 | GQ274032 | 952 | 241–246 | 334–651 | GTTATGG | 106 | 12.2 | 677–682 |
Mor23 | GQ274024 | 980 | 278–283 | 355–669 | CAGATGG | 105 | 12.4 | 804–809 |
aPositions are indicated as the number of nucleotides from the first nucleotide at the origin of replication to the nucleotides of the TATA box, initiation codon, stop codon, and polyadenylation signal
bFirst nucleotide of the start codon and last nucleotide before the termination codon