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. Author manuscript; available in PMC: 2011 Jul 7.
Published in final edited form as: Hum Genet. 2005 May 10;117(2-3):133–142. doi: 10.1007/s00439-005-1299-7

Table 1.

PCR fragments, primers, and conditions for all NCAM1 fragments analyzed

Fragment name Forward primer (5′-3′) Reverse primer (5′-3′) HPLC temp (°C)
Exon 1 ggctgggactgtcactcatt gcaaaccagattgagaattaaaa 60
Exon 2 gggtttcattcttgaacattgg cctgagggctcctgctctac 60
Exon 3 ggggacttattagtcttttcgactt gcagaagaagaaggaggctct 61
Exon 4 gaagcagctgttttccctca tgaaaaagctagggaacttgg 60.5
Exon 5 tgcagatgctctctgactga ccaaggttgtagcaatgcag 60
Exon 6 tgtctcttctccaggccatt gactttgtgatgccccattc 59.5
Exon 7 tggtcgaaatcatgctactttg attgtggcagagcagtgacc 60.5
VASE ctaagggggaaaaaaagctggaca tcatccactcccaacacagc 56
Exon 8 tgcatgccatcatttaaacc attccaaggccctgaaactc 56, 60.5
Exon 9 ccttgggctctgacatgc catcctgaccctgccttg 63.5
Exon 10 aatcatggcagtcatcctga ttggagcccacctagagtca 61
Exon 11 tgaccatcccataggacactt attgggctggcagggttag 60
Exon 12 atggtcttgggccaaactg caggtggggacatctgagta 61
SEC gagggtgatgccgagaaggaa cacacggagggaacaccaaga 57
Exon 13 gaaatagaattgctggaccaaa aaggtgggctgggaaaag 57
Exon 14 cctgtcactccatcccattc cagggttctggtgaagtctga 60
Exon 15 tcccgtaagttttgcctattg caagcaagttgtcagggttg 60.5
Exon 16 gtctggaggtctcgcatctc caaacctcagcaaggtggac 63
Exon 17 gccttgggttgagtcatagc gggtctctacggagcaggt 63
Exon 18 agaccgtggtctcagtggtt tggaaatgctctggtgaagc 60.5
Promoter 1 gagggtttcagtgttctaggc aagaaaactccgatgtttggaa 54
Promoter mid ttttcttcgggttatttctgga ccagccttccttaatcagca 56.5
Promoter 2 ctgattaaggaaggctgggta tttttgcagaattgtttcctg 63