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. 2011 Jun 20;108(27):11087–11092. doi: 10.1073/pnas.1016685108

Table 1.

Folding and unfolding times (μs) and stabilities (kcal/mol) from simulation and experiment

Param. Source 300 K 325 K 350 K
τF expt 7.5 6.5 6.3
Inline graphic sim:U-A 59.0 (26.0) 12.4 (12.0) 5.3 (1.0)
Inline graphic sim:U-B 8.2 (3.0) 4.8 (2.0) 4.6 (1.0)
τF,1 sim:U-B 29.2 (8.0) 6.3 (1.0)
τF,2 sim:U-B 0.08 (0.1) 0.01 (0.02)
A1 sim:U-B 0.977 (0.005) 0.974 (0.004)
τU expt 6.2 1.3 0.4
Inline graphic sim:F 25.0 (14.4) 3.1 (1.1)
ΔGUF expt −0.11 −1.07 −1.95
ΔGUF sim:τF/τU −0.52 (0.44) −0.48 (0.55)
ΔGUF sim:REMD 0.28 (0.43) −0.66 (0.56)

U-A and U-B refer to the initial conditions for folding time calculations; stabilities are calculated either from REMD simulations (51) or the ratio of folding times from U-A. Folding/unfolding times are estimated by maximum likelihood from first passage times, either by assuming single-exponential (τMFPT) or double-exponential kinetics p(t) = A1 exp(-t/τF,1) + (1 - A1) exp(-t/τF,2) (see SI Appendix).