Table 1.
Param. | Source | 300 K | 325 K | 350 K | |||
τF | expt | 7.5 | 6.5 | 6.3 | |||
sim:U-A | 59.0 | (26.0) | 12.4 | (12.0) | 5.3 | (1.0) | |
sim:U-B | 8.2 | (3.0) | 4.8 | (2.0) | 4.6 | (1.0) | |
τF,1 | sim:U-B | 29.2 | (8.0) | — | 6.3 | (1.0) | |
τF,2 | sim:U-B | 0.08 | (0.1) | — | 0.01 | (0.02) | |
A1 | sim:U-B | 0.977 | (0.005) | — | 0.974 | (0.004) | |
τU | expt | 6.2 | 1.3 | 0.4 | |||
sim:F | 25.0 | (14.4) | — | 3.1 | (1.1) | ||
ΔGUF | expt | −0.11 | −1.07 | −1.95 | |||
ΔGUF | sim:τF/τU | −0.52 | (0.44) | — | −0.48 | (0.55) | |
ΔGUF | sim:REMD | 0.28 | (0.43) | — | −0.66 | (0.56) |
U-A and U-B refer to the initial conditions for folding time calculations; stabilities are calculated either from REMD simulations (51) or the ratio of folding times from U-A. Folding/unfolding times are estimated by maximum likelihood from first passage times, either by assuming single-exponential (τMFPT) or double-exponential kinetics p(t) = A1 exp(-t/τF,1) + (1 - A1) exp(-t/τF,2) (see SI Appendix).