. Author manuscript; available in PMC: 2012 Jul 15.

Published in final edited form as: J Immunol. 2011 Jun 20;187(2):835–841. doi: 10.4049/jimmunol.1100125

Table I.

Charged amino acid residues at N and C termini of TCRα junctions

Sequence	^areplicate isolations	^bV-Jα Sequences	^cTCRα junctions
1	8
2	6
3	4
4	3
5	3
6	3
7	2
8	1
9	1
10	1
11	1
12	1
13	1
14	1
15	1
16	1
17	1
18	1
19	1
20	1
21	1
22	1
23	1
24	1
25	1

TCR Vα sequences are listed for one representative experiment (mouse 1) among 3 independent experiments.

The number of clones that shared each sequence in the d-NALT.

Predicted positions of Vα and Jα (red and green).

positions of charged residues R,E,D,K,H (yellow), tyrosines (red), asparagines (blue) and phenylalanines (green).

Sequence	^areplicate isolations	^bV-Jα Sequences	^cTCRα junctions
1	8
2	6
3	4
4	3
5	3
6	3
7	2
8	1
9	1
10	1
11	1
12	1
13	1
14	1
15	1
16	1
17	1
18	1
19	1
20	1
21	1
22	1
23	1
24	1
25	1

Sequence	^areplicate isolations	^bV-Jα Sequences	^cTCRα junctions
1	8
2	6
3	4
4	3
5	3
6	3
7	2
8	1
9	1
10	1
11	1
12	1
13	1
14	1
15	1
16	1
17	1
18	1
19	1
20	1
21	1
22	1
23	1
24	1
25	1

Sequence	^areplicate isolations	^bV-Jα Sequences	^cTCRα junctions
1	8
2	6
3	4
4	3
5	3
6	3
7	2
8	1
9	1
10	1
11	1
12	1
13	1
14	1
15	1
16	1
17	1
18	1
19	1
20	1
21	1
22	1
23	1
24	1
25	1