Table V.
Shared junctional sequences in the d-NALT, lung and BAL of Mouse 1
| d-NALT V alpha | Lung V Alpha | BAL V Alpha |
|---|---|---|
| A. MOUSE 1: SHARED SEQUENCES BETWEEN URT AND LRT (number of single cells per tissue sharing sequence) | ||
| REDNYAQGLTFGLGTR (8) | REDNYAQGLTFGLGTR (4) | REDNYAQGLTFGLGTR (6) |
| GGANTNKVVFGTGTRL (6) | GGANTNKVVFGTGTRL (2) | GGANTNKVVFGTGTRL (2) |
| RDTNAYKVIFGKGTHL (4) | RDTNAYKVIFGKGTHL (1) | RDTNAYKVIFGKGTHL (5) |
| REGNMGYKLTFGTGTS (3) | REGNMGYKLTFGTGTS (2) | REGNMGYKLTFGTGTS (1) |
| REGDYANKMIFGLGTI (3) | REGDYANKMIFGLGTI (2) | REGDYANKMIFGLGTI (4) |
| REDNTGYQNFYFGKGT (2) | REDNTGYQNFYFGKGT (1) | REDNTGYQNFYFGKGT (2) |
| REGDDSGYNKLTFGKG (1) | REGDDSGYNKLTFGKG (2) | REGDDSGYNKLTFGKG (1) |
| GEENSNNRIFFGDGTQ (1) | GEENSNNRIFFGDGTQ (1) | - |
| REHMATGGNNKLTFGQ (1) | REHMATGGNNKLTFGQ (1) | - |
| AALDTNAYKVIFGKGTHL (1) | AALDTNAYKVIFGKGTHL (1) | |
| REANMGYKLTFGTGTS (1) | - | REANMGYKLTFGTGTS (1) |
| MGYSNNRLTLGKGTQV (1) | - | MGYSNNRLTLGKGTQV (1) |
| REDNTNKVVFGTGTRL (1) | - | REDNTNKVVFGTGTRL (2) |
| B. MOUSE 1: SHARED SEQUENCES BETWEEN LUNG AND BAL | ||
| REDMGYKLTFGTGTSL (1) | REDMGYKLTFGTGTSL (1) | |
| C. MOUSE 1: UNSHARED SEQUENCES | ||
| DDSGGYKVVFGSGTRL (3) | ||
| REVNTGNYKYVFGAGT (1) | ||
| REGDSAGNKLTFG (1) | SDYNVGDNSKLIWGLG (1) | |
| DTNAYKVIFGKGTHLH (1) | DAQTQVVGQLTFGRGT (1) | |
| RVAGSGGKLTLGAGTR (1) | SDTNAYKVIFGKGTHL (1) | EGGRALIFGTGTTVSV (1) |
| REDENMGYKLTFGTGT (1) | REGRATGGNNKLTFGQ (1) | ETNYNVLYFGSGTKLT (1) |
| KGGNYKPTFGKGTSLV (1) | GDTNAYKVIFGKG (1) | GDLGVATGGNNKLTFG (1) |
| REDTNTGKLTFGDGTV (1) | - | VRTGGYKVVFGSGTRL (1) |
| LLDYANKMIFGLGTIL (1) | - | NGGDTNAYKVIFGKGTHL (1) |
| GDLNSGSWQLIFGSGT (1) | - | REGGTNAYKVIFGKGT (3) |
| VRTGGYKVVFGSGTRL (1) | - | - |
| GGDNRIFFGDGTQLVV (1) | - | - |
Legend: TCRα sequences from d-NALT, BAL and lung are listed to demonstrate sharing of precise TCRα junctions.