Table 2.
List of studied SNPs with chromosome location an reference number
| SNP | # rs | Nucleotide Change | SNP Region | Chromosome | |
|---|---|---|---|---|---|
| Nucleotide Excision Repair | |||||
| XPC codon 499 | 2228000 | C/T | Ex9−377C>T | 3 | |
| XPC codon 939 | 2228001 | C/A | Ex16+211C>A | 3 | |
| XPD codon 156 | 238406 | A/C | Ex6−10A>C | 19 | |
| XPD codon 751 | 13181 | A/C | Ex23+61A>C | 19 | |
| XPG codon 1104 | 17655 | G/C | Ex15−344G>C | 13 | |
| ERCC1 codon 504 | 3212986 | T/G | 196bp 3′ of STP T>G | 19 | |
| CCNH codon 270 | 2266690 | T/C | Ex7+49T>C | 5 | |
| Base Excision Repair | |||||
| XRCC1 codon 194 | 1799782 | C/T | Ex6−22C>T | 19 | |
| XRCC1 codon 399 | 25487 | A/G | Ex10−4A>G | 19 | |
| OGG1 codon 326 | 1052133 | C/G | Ex6−315C>G | 3 | |
| PARP1 codon 762 | 1136410 | T/C | Ex17+8T>C | 1 | |
| APEX 1 codon 148 | 3136819 | C/T | IVS4−61C>T | 14 | |
| POLB-10 | 3136794 | A/G | IVS11−235A>G | 8 | |
| Direct reversal of damage | |||||
| MGMT codon 143 | 2308321 | A/G | Ex7+13A>G | 10 | |
| MGMT codon 178 | 2308327 | A/G | Ex7+119A>G | 10 | |
| MGMT codon 84 | 12917 | C/T | Ex5−25C>T | 10 | |
| Others | |||||
| XRCC3 codon 241 | 861539 | C/T | Ex8−53C>T | 14 | |
| NBN codon 185 | 1805794 | G/C | Ex6−32G>C | 8 | |
| LIG1-01 codon 170 | 20580 | C/A | Ex7+44C>A | 19 | |
| LIG1-03 codon 114 | 20579 | C/T | Ex2−24C>T | 19 | |
| PARG codon 12 | 1801282 | C/G | Ex4−49C>G | 3 |