Table 4.
Association of mycelia small RNAs with ESTs and ESS.
| Genomea | Intergenica | Genesb | ||||
|---|---|---|---|---|---|---|
| Read Countc | Featuresd | Read Count | Features | Read Count | Features | |
| ESSe | 26027 | 3725 | 480 | - | 6155 | 1637 |
| MPSS | 4174 | 381 | 73 | - | 1173 | 250 |
| MYC | 3921 | 237 | 60 | - | 1038 | 154 |
| APP | 3446 | 144 | 37 | - | 1071 | 97 |
| SAGE | 4373 | 268 | 213 | - | 1186 | 163 |
| CPA-sRNA | 25058 | 3076 | 370 | - | 5681 | 1226 |
| EST | 23918 | 8258 | 382 | - | 7055 | 6380 |
| EST or ESS | 29290 | 9058 | 663 | - | 8039 | 6847 |
a Small RNAs that overlap the sequence of ESS and/or ESTs at the same genome or intergenic location.
b Small RNAs that map to transcriptionally (ESS and/or EST) supported gene loci.
c Number of small RNAs that map to a given feature and containing ESS and/or EST transcriptional evidence.
d Number of features containing ESS and/or EST evidence associated with small RNAs.
e ESS (Expressed Short Sequence) are either MPSS, SAGE or CPA-sRNA.