Table 5.
Association of appressoria small RNAs with ESTs and ESS.
| Genomea | Intergenica | Genesb | ||||
|---|---|---|---|---|---|---|
| Read Countc | Featuresd | Read Count | Features | Read Count | Features | |
| ESSe | 5608 | 2249 | 29 | - | 1575 | 518 |
| MPSS | 900 | 88 | 5 | - | 401 | 39 |
| MYC | 817 | 49 | 4 | - | 325 | 21 |
| APP | 764 | 39 | 4 | - | 378 | 19 |
| SAGE | 1188 | 62 | 10 | - | 431 | 26 |
| CPA-sRNA | 5461 | 2099 | 20 | - | 1477 | 455 |
| EST | 4310 | 3436 | 11 | - | 1618 | 1770 |
| EST or ESS | 6018 | 3865 | 35 | - | 1953 | 2033 |
a Small RNAs that overlap the sequence of ESS and/or ESTs at the same genome or intergenic location.
b Small RNAs that map to transcriptionally (ESS and/or EST) supported gene loci.
c Number of small RNAs that map to a given feature and containing ESS and/or EST transcriptional evidence.
d Number of features containing ESS and/or EST evidence associated with small RNAs.
e ESS (Expressed Short Sequence) are either MPSS, SAGE or CPA-sRNA.