Table 1.
Redundant SSR-ESTs | Non-redundant SSR-ESTs | Genomic SSR sequences | |
---|---|---|---|
Total % | 6,447 | 1,701 | 1,346 |
Di- | 1,835(28.5%) | 664(39.0%) | 699(51.9%) |
Tri- | 3,235(50.2%) | 710(41.7%) | 341(25.3%) |
Tetra- | 391(6.1%) | 125(7.3%) | 154(25.2%) |
Penta- | 618(9.6%) | 134(7.9%) | 99 (7.4%) |
Hexa- | 736(11.4%) | 179(10.5%) | 53 (3.9%) |
Abundant type | |||
Di- | AG/CT(18.9%) | AG/CT(26.9%) | AT/AT (33.0%) |
Tri- | AGG/CCT(14.8%) | AAG/CTT (11.3%) | AAT/ATT (18.6%) |
Tetra- | AAGG/CCTT(1,7%) | AAAT/ATTT(2.4%) | AAAT/ATTT(7.0%) |
Penta- | AAAAT/ATTTT(2.8%) | AAAAT/ATTTT(2.1%) | AAAAT/ATTTT(3.8%) |
Hexa- | AGGGTC/AGTCCC(2.6%) | ACCCTG/ACTGGG(1.1%) | AAAAAT/TAAAAA(1.7%) |