Table 2.
Contigs with high read number in the Atta laevigata cDNA library.
| Contig | Reads | Rate* | Best hit (organism) | Function+ |
|---|---|---|---|---|
| 311 | 123 | 76.9 | COX I (Myrmica rubra) | 1 |
| 235 | 52 | 32.5 | Similar to paramyosin CG5939-PA (Apis mellifera) | 2 |
| 183 | 47 | 29.4 | ATP synthase F0 subunit 6 (Camponotus sayi) | 1 |
| 037 | 43 | 26.9 | COX III (Bombyx mandarina) | 1 |
| 294 | 40 | 25.0 | Similar to muscle protein 20 CG4696-PA (Apis mellifera) | 2 |
| 056 | 30 | 18.8 | COX II (Atta colombica) | 1 |
| 330 | 30 | 18.8 | Actin-5 (Bactrocera dorsalis) | 2 |
| 289 | 25 | 15.6 | Similar to limpet CG32171-PD (Apis mellifera) | 3 |
| 337 | 20 | 12.5 | Muscle LIM protein (Nasonia vitripennis) | 3 |
| 273 | 19 | 11.9 | Cytochrome b (Formica pratensis) | 1 |
| 268 | 14 | 8.8 | Similar to muscle LIM protein at 84B (Apis mellifera) | 3 |
| 046 | 14 | 8.8 | Similar to CG5023-PA (Apis mellifera) | 3 |
| 015 | 13 | 8.1 | Troponin I (Apis mellifera) | 2 |
| 116 | 12 | 7.5 | Similar to muscle LIM protein at 84B (Apis mellifera) | 3 |
| 069 | 11 | 6.9 | NADH dehydrogenase subunit 4 (Harpiosquilla harpax) | 1 |
| 328 | 10 | 6.3 | AGAP005400-PA (Anopheles gambiae) | 3 |
* Number of reads divided per 1.6 which is the mean number of reads (3,203) per US (2,006).
+1. ATP synthesis coupled to redox reactions in mitochondria (273 reads). 2. Muscle or cytoskeleton structure (135 reads). 3. Transcription regulatory processes through homeobox or signaling proteins (95 reads).