Table 2.
Primers
| Function | Primer no. | Name | Sequence (5′ to 3′) |
|---|---|---|---|
| Strain construction | 83 | GlyF | GGCGGAGGCGGCGGAGGCGGAGGCGGAGG |
| 84 | loxp-R | CGAGCTCGGATCCATAACTTCGTATAGCA | |
| 1053 | hphSM-F | AAAAAGCCTGAACTCACCGCGACG | |
| 1054 | hphSM-R | TCGCCTCGCTCCAGTCAATGACC | |
| 1797 | 2161GlyR | CCTCCGCCTCCGCCTCCGCCGCCTCCGCCCGTCACCTCTTCGTCTTCGCC | |
| 1798 | 2161GlyF | AGTGATGGGATCGATTCGGGG | |
| 1799 | 2161loxR | TGTCCTGATTGAGTCCCAACC | |
| 1800 | 2161loxF | TGCTATACGAAGTTATGGATCCGAGCTCGGAGTGTTTGTTACCATTGATG | |
| Region-specific ChIP-PCR analysis | 911 | CenVII_Rep1F | ATGGAGACAGCTCCGGTCGTGACC |
| 910 | CenVII_Rep1R | TAGACAATTGTACGACGTAGAG | |
| 917 | CenVII_Rep3F | GGATAAGTGTTGGTGGGTCTCTGG | |
| 924 | CenVII_Rep3R | GCGCCTTGTTGAAATTAGCAATTA | |
| 914 | CenVII_Rep4F | ACTTGGTCATTTTTTGGACTTGG | |
| 918 | CenVII_Rep4R | CAATGTTAGGTGTCATCGGCTGTC | |
| 940 | CenVII_Rep8F | GGACTTTGTGTGGGATCACCAACGC | |
| 933 | CenVII_Rep8R | CGCCAAATTCGTTAAATTAATCGG | |
| 928 | CenVII_Rep9F | GTTAGAAAGGGTTTATAACTTGTG | |
| 929 | CenVII_Rep9R | GGTTTTGGAGCCGGGTCGGGTCC | |
| 1105 | LGIV_Rep1F | GTATTTGATAATGAGACACTTCTC | |
| 1106 | LGIV_Rep1R | ATCATTTATAGACGGAATTTTACC | |
| 1107 | LGIV_Rep2F | GCTGGGGAACAAGGCGTATAAAGG | |
| 1108 | LGIV_Rep2R | GGGGGAAGCAGGTAATATAGAAGG | |
| 1115 | LGIV_Rep4F | TACCGCCGTCCTAAAGGGAAGAGG | |
| 1116 | LGIV_Rep4R | CGTAATTGTATTTATCGAACTTAT | |
| 1117 | LGIV_Rep5F | TAGTATAATAGAAGTTCGATAGAG | |
| 1118 | LGIV_Rep5R | AAAGACGGAAGGGGTTATACTATT | |
| 1119 | LGIV_Rep6F | AATTAGAGAATAGATTTACTAGCC | |
| 1120 | LGIV_Rep6R | CGGACGAACTGGGTTTAATTATTC | |
| 1121 | LGIV_Rep7F | ATAGAGGCGAAATCTAATATATTG | |
| 1122 | LGIV_Rep7R | TTTCTACTTACGGTCGATTGACGG | |
| 1123 | LGIV_Rep8F | TATTTATTTTAACGGCCAGTAAGC | |
| 1124 | LGIV_Rep8R | ATTAATTATGAGCTATTTAGACCC | |
| 1125 | LGIV_Rep9F | GTACCATATTTTCTAAAAGGCAAT | |
| 1126 | LGIV_Rep9R | CTTTAATTAGGCGGACAGGCCGAT | |
| 1127 | LGIV_Rep10F | TGCGACTTTCTTATTTTGTAGGGG | |
| 1128 | LGIV_Rep10R | AGGACTATAAAGTATATTACTAGG | |
| 1085 | TEL_ILF | CTTCTTGCGTCTTGCCTGCTC | |
| 1086 | TEL_ILR | CCTTTTCGTTCGGTTGACAGC | |
| 1087 | TEL_VILF | AACTTGGCACCCTCCGCGTT | |
| 1088 | TEL_VILR | CCCCTCTAAGTTTTCCGATT | |
| 913 | Fsr126F | TAATGAAAGACAACCTCGGAGTCC | |
| 938 | Fsr126R | GCACGTAAACCTGCATATGAAGTG | |
| 915 | Fsr92F | TTCGCAATGGTGTCCGGCTCTCGG | |
| 920 | Fsr92R | GTGTGGAAACCATGCGGCTCAACC |