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. Author manuscript; available in PMC: 2011 Jul 12.
Published in final edited form as: Biol Psychiatry. 2006 Apr 21;60(2):152–162. doi: 10.1016/j.biopsych.2006.02.015

Table 5.

Case-Control Analyses: Four SNP Haplotype Results by Sample

Sample Ethnicity Cases/Control
Subjects		 G-G-G-G Frequency
(Case)		 G-G-G-G Frequency
(Control)		 A-T-A-A Frequency
(Case)		 A-T-A-A Frequency
(Control)		 Omnibus
p-Valuea
1 Caucasian 151/127 .486 .484 .416 .408 .596
4 Caucasian 711/708 .459 .497 .37 .343 .445
10b Caucasian 612/704 .505 .491 .372 .395 .566
11 Caucasian 299/645 .521 .502 .368 .402 .64
12b Caucasian 255/242 .478 .463 .438 .378 .037
13b Caucasian 580/596 .477 .525 .408 .359 .032
5 Brazilian 271/576 .412 .402 .399 .416 .739
8b Chinese 609/157 .481 .284 .376 .234 .0001

Estimated haplotype frequencies in cases and control subjects from individual samples.

Samples are grouped by ethnicity.

SNP, single nucleotide polymorphism.

a

p-values represent EM algorithm estimations of SNP haplotypes omnibus likelihood ratio tests of association for all haplotypes.

b

Unpublished samples.