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. Author manuscript; available in PMC: 2012 Jul 1.
Published in final edited form as: Mol Microbiol. 2011 Jun 7;81(2):486–499. doi: 10.1111/j.1365-2958.2011.07706.x

Table 2.

Primers used in this study.

Primer name Primer sequence
csgE KO F no FRT AGCGGTTTCCTGGGCAAACGATAACCTCAGGCGATAAAGCCACGCTGCCGCAAGCACT
C
csgF KO R no FRT ATAAGCGCTGCATGATTATTTTCCTTATGAAGCTGGGGAATAGGAACTTCAAGATCC
csgA F Kpn-RBS-Nco GTTTGGTACCACACAGGAAACAGACCATGGCGAAACTTTTAAAAGTAGCAGCAATTGC

AGC
csgA-cpxP R CGCCTGAACCGACTTCAGCATTTGGGCCGCTATTATTACC
csgA-cpxP F GGTAATAATAGCGGCCCAAATGCTGAAGTCGGTTCAGGCG
cpxP his R Pst (LR) GTTTCTGCAGTTAGTGGTGGTGGTGGTGGTGCTGGGAACGTGAGTTGCTAC
csgE F Kpn-RBS-Nco GTTTGGTACCACACAGGAAACAGACCATGGCGAAACGTTATTTACGCTGGATTGTGGC
csgE R 3Xs-Pst GTTTCTGCAGTTATTAGATCCTTAGAATTCATCATGCGCCAAATCGCCC
csgE R BamHI GTTTGGATCCTTAGAATTcATCATGCGCCAAATCGCC
csgF F Nco GTTTCCATGGCACGTGTCAAACATGCAGTAG
csgF R Pst GTTTCTGCAGTTAAAAATCGGTTGAGTTATTTTGTAAACC
a22cpxP F delA22 CGGTAGCGCTCTGGCAGCTGAAGTCGGTTC
a22cpxP R delA22 GAACCGACTTCAGCTGCCAGAGCGCTACCG
papDss(ala) KpnI
mcpxP F NcoI
CGAGCCATGGCGATTCGAAAAAAGATTCTGATGGCTGCCATCCCCCTGTTTGTTATATC
CGGGGCAGACGCTGGTACCGCTGAAGTCGGTTCAGGCGATAAC
cpxP his R PstI (AN) CTCGCTGCAGTTAGTGGTGGTGGTGGTGGTGCTGGGAACGTGAGTTGCTACTACT
papDss(ala) mcsgA F
NcoI
CGAGCCATGGCGATTCGAAAAAAGATTCTGATGGCTGCCATCCCCCTGTTTGTTATATC
CGGGGCAGACGCTGGTGTTGTTCCTCAGTACGGCGG
csgA22 R KpnI CGAGGGTACCATTTGGGCCGCTATTATTACCGCCACC
papD2 F KpnI CGACGGTACCGAAGTATGGCAGGACCAGTTAATTCTG
papD2-his R PstI CGACCTGCAGTTAGTGGTGGTGGTGGTGGTGTTTCTCTTTTTTCACAGAGCAACGGCTA
C
Sec- CsgE For NcoI GCGTTTCCATGGCCGTTGAGGTAGAAGTCCCGGGA
CsgE 6x His Rev
BamHI
GTTTAAAGCTTGGATCCTTAGTGATGGTGATGGTGATGGAATTCATCATGCGCCAAATC